RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ST8SIA4Q92187 359 aa14.33□□□□□ -0.11
USHBP1-203ENST00000431146 MRGPRFQ96AM1 343 aa14.33□□□□□ -0.11
USHBP1-203ENST00000431146 ZNF71Q9NQZ8 489 aaPredicted RBP14.33□□□□□ -0.11
USHBP1-203ENST00000431146 CA10Q9NS85 328 aa14.33□□□□□ -0.11
USHBP1-203ENST00000431146 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.11
USHBP1-203ENST00000431146 DISC1C4P0D8 188 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 ANXA3P12429 323 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 COX5AP20674 150 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 HAAOP46952 286 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 MEF2DQ14814 521 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 ASCL4Q6XD76 172 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 CXorf67Q86X51 503 aaPredicted RBP14.33□□□□□ -0.12
USHBP1-203ENST00000431146 UXS1Q8NBZ7 420 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 TECTBQ96PL2 329 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 PLSCR4Q9NRQ2 329 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 PLEKHA6Q9Y2H5 1048 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 FAM215AQ9Y5M1 114 aa14.33□□□□□ -0.12
USHBP1-203ENST00000431146 ZGRF1Q86YA3 2104 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 TMEM82A0PJX8 343 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 PQLC2LA1A4F0 135 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 BET1O15155 118 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 IL5P05113 134 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 GZMKP49863 264 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 SNU13P55769 128 aaKnown RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 C4orf46Q504U0 113 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 ATPAF1Q5TC12 328 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 DYRK2Q92630 601 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 OCSTAMPQ9BR26 566 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 FAAP24Q9BTP7 215 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 CHIAQ9BZP6 476 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 GPN1Q9HCN4 374 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 ZNF701Q9NV72 531 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 PROCRQ9UNN8 238 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 VSIG4Q9Y279 399 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 MBD3L4A6NDZ8 208 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 MBD3L3A6NE82 208 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 MBD3L5A6NJ08 208 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 ZNF732B4DXR9 585 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 TRIM77I1YAP6 450 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 SMPD2O60906 423 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 CST4P01036 141 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 CRYABP02511 175 aaKnown RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 CEACAM21Q3KPI0 293 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 OSR2Q8N2R0 312 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 MUC20Q8N307 709 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 WDR31Q8NA23 367 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 CSNK2A3Q8NEV1 391 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 OR10Z1Q8NGY1 313 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 MBD3L2Q8NHZ7 208 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-203ENST00000431146 SLAMF9Q96A28 289 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 OR2J1Q9GZK6 312 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 CDH20Q9HBT6 801 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 MGAT4CQ9UBM8 478 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 ST3GAL6Q9Y274 331 aa14.32□□□□□ -0.12
USHBP1-203ENST00000431146 MEIKINA0A087WXM9 373 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 OR2AT4A6NND4 320 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 WDR1O75083 606 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 CGAP01215 116 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 IFNA6P05013 189 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 AMY2BP19961 511 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 HOXC12P31275 282 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 C2orf68Q2NKX9 166 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 SEZ6L2Q6UXD5 910 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 ASCC1Q8N9N2 400 aaKnown RBP14.31□□□□□ -0.12
USHBP1-203ENST00000431146 GALNT11Q8NCW6 608 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 PXT1Q8NFP0 134 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 OR5L1Q8NGL2 311 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 WDR89Q96FK6 387 aaPredicted RBP14.31□□□□□ -0.12
USHBP1-203ENST00000431146 HS3ST6Q96QI5 342 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 PRRT1Q99946 306 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 SLC25A21Q9BQT8 299 aaPredicted RBP14.31□□□□□ -0.12
USHBP1-203ENST00000431146 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.31□□□□□ -0.12
USHBP1-203ENST00000431146 ANAPC10Q9UM13 185 aa14.31□□□□□ -0.12
USHBP1-203ENST00000431146 HEATR1Q9H583 2144 aaKnown RBP14.31□□□□□ -0.12
USHBP1-203ENST00000431146 FIGNL2A6NMB9 653 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 SERPINE3A8MV23 424 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 C3orf80F5H4A9 247 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 F8VVB4 439 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 F8VWA3 439 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 MSTNO14793 375 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 ZNF780AO75290 641 aaPredicted RBP14.3□□□□□ -0.12
USHBP1-203ENST00000431146 CNOT4O95628 575 aaKnown RBP14.3□□□□□ -0.12
USHBP1-203ENST00000431146 BCL3P20749 454 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 CA6P23280 308 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 AP2S1P53680 142 aaPredicted RBP14.3□□□□□ -0.12
USHBP1-203ENST00000431146 TBR1Q16650 682 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 Q5BKY6 102 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 SHEQ5VZ18 495 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 RPUSD3Q6P087 351 aaKnown RBP14.3□□□□□ -0.12
USHBP1-203ENST00000431146 FAM180AQ6UWF9 173 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 FTMTQ8N4E7 242 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 OR10AD1Q8NGE0 317 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 ZNF436Q9C0F3 470 aaPredicted RBP14.3□□□□□ -0.12
USHBP1-203ENST00000431146 DLL4Q9NR61 685 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 ZZEF1O43149 2961 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 IGKV1D-8A0A087WSZ0 117 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 ANKRD30BLA7E2S9 258 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 SNRPGP15A8MWD9 76 aa14.3□□□□□ -0.12
USHBP1-203ENST00000431146 SDCBPO00560 298 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms