RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 GLYATL1Q969I3 302 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 NEIL2Q969S2 332 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 LPAR4Q99677 370 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SLC25A39Q9BZJ4 359 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 OR2H1Q9GZK4 316 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 Q9N2K0 584 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 WRAP73Q9P2S5 460 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 USP22Q9UPT9 525 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ENPP4Q9Y6X5 453 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 MST1RQ04912 1400 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 A0A1W2PQF6 199 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PRR19A6NJB7 356 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 LATO43561 262 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 CATP04040 527 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 TMEM225BP0DP42 221 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 TPT1P13693 172 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PVRP15151 417 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 CD40P25942 277 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF121P58317 390 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 TIMM10P62072 90 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ZFP36L1Q07352 338 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 CDK5R2Q13319 367 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 IER5Q5VY09 327 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 CD276Q5ZPR3 534 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PLAG1Q6DJT9 500 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 BTNL8Q6UX41 500 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 KLHDC8AQ8IYD2 350 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 C2CD4AQ8NCU7 369 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 OR4K5Q8NGD3 323 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FRZBQ92765 325 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 IKZF5Q9H5V7 419 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 HINT3Q9NQE9 182 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 GKN1Q9NS71 199 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 B9D1Q9UPM9 204 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 INO80Q9ULG1 1556 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SNED1Q8TER0 1413 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 KBTBD11-OT1A0A1B0GTJ5 212 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 TTC24A2A3L6 582 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAM159BA6NKW6 160 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SLC38A8A6NNN8 435 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 J3KT08 172 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 GABRPO00591 440 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 NDUFS4O43181 175 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SPRY2O43597 315 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PLPP2O43688 288 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PAGE4O60829 102 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SEMG1P04279 462 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 CD99P14209 185 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SELPP16109 830 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAHP16930 419 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ACRV1P26436 265 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SOX3P41225 446 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 GNG4P50150 75 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 CXCL9Q07325 125 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PRSS48Q7RTY5 328 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAM19A5Q7Z5A7 132 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 C5orf24Q7Z6I8 188 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 TBC1D26Q86UD7 250 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 C8orf46Q8TAG6 207 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF675Q8TD23 568 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PTPMT1Q8WUK0 201 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 TMEM37Q8WXS4 190 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 STARD4Q96DR4 205 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 MS4A6AQ9H2W1 248 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 EXO1Q9UQ84 846 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 F11RQ9Y624 299 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ANKARQ7Z5J8 1434 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 KIR2DL5BA0A0G2JN68 375 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 KIR2DL5BA0A0G2JPC4 375 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 LOC107984640A0A0U1RRK4 108 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 GGT3PA6NGU5 568 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A20PA6NIJ5 464 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A7PA6NKC0 464 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A22PA8MWA6 464 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A12PA8MX19 464 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 FAM90A23PA8MXZ1 464 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 TNFSF11O14788 317 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 EEF1E1O43324 174 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 MMP23AO75900 390 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PGA4P0DJD7 388 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PGA5P0DJD9 388 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SSR2P43308 183 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 BACE1P56817 501 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 LILRA4P59901 499 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 CDC42P60953 191 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 YBX1P67809 324 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 EWSR1Q01844 656 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SSX1Q16384 188 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 POM121L1PQ3SYA9 428 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF385BQ569K4 471 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 AGTRAPQ6RW13 159 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 MRPL55Q7Z7F7 128 aaKnown RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 KIR2DL5AQ8N109 375 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 PNKDQ8N490 385 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 KIR2DL5BQ8NHK3 375 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF418Q8TF45 676 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 ZMYND19Q96E35 227 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-203ENST00000430976 SCGB3A2Q96PL1 93 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 HSPB9Q9BQS6 159 aa4.72□□□□□ -1.65
PTPN4-203ENST00000430976 DOHHQ9BU89 302 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms