RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ELOVL6Q9H5J4 265 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 METTL7AQ9H8H3 244 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 CCNB1IP1Q9NPC3 277 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 DMAC2Q9NW81 257 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 SEC14L3Q9UDX4 400 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 CLEC2DQ9UHP7 191 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 ING4Q9UNL4 249 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 NTNG1Q9Y2I2 539 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 OARD1Q9Y530 152 aa3.27□□□□□ -1.89
HMGB3-203ENST00000430118 IGLV3-10A0A075B6K4 115 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 A0A1B0GVI7 797 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 TRIM49D1C9J1S8 452 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 TSTD3H0UI37 97 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 NBR2O15453 112 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 DLEU1O43261 78 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 KLRC4O43908 158 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 FADS1O60427 444 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 ZMPSTE24O75844 475 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SRP72O76094 671 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 LRATO95237 230 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 F10P00742 488 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 IGHG4P01861 327 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 HLA-DQB1P01920 261 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 GUSBP08236 651 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 WNT2P09544 360 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 OR56A5P0C7T3 313 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 METTL15P1P0C7V9 234 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PVRP15151 417 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 NELFEP18615 380 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 RAB3BP20337 219 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PVALBP20472 110 aaPredicted RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 RPS3P23396 243 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 G0S2P27469 103 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 MAGEA6P43360 314 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 P2RY1P47900 373 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 CSNK1DP48730 415 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 RPL34P49207 117 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 CEBPGP53567 150 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 GFERP55789 205 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PRPS1P60891 318 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 RAB2AP61019 212 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 CXCR4P61073 352 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PKIAP61925 76 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 RAP1AP62834 184 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 DCDP81605 110 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 MRPS11P82912 194 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 LIPEQ05469 1076 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 BCL2L1Q07817 233 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 TSPAN31Q12999 210 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 BIKQ13323 160 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 QPRTQ15274 297 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SIX1Q15475 284 aaPredicted RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 NRF1Q16656 503 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SLC5A12Q1EHB4 618 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 C17orf58Q2M2W7 97 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 GGTA1PQ4G0N0 100 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 BCL7AQ4VC05 210 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 NHLRC3Q5JS37 347 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 ARMC12Q5T9G4 340 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PRAMEF5Q5TYX0 476 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PRAMEF6Q5VXH4 476 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 MEDAGQ5VYS4 303 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 UQCC3Q6UW78 93 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 CERS6Q6ZMG9 384 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SLC16A14Q7RTX9 510 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SLC16A13Q7RTY0 426 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PAGE2Q7Z2X7 111 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 DHFR2Q86XF0 187 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SNX29P2Q8IUI4 249 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 KLHDC8BQ8IXV7 354 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 DEFB106AQ8N104 65 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 ARRDC1Q8N5I2 433 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PQLC3Q8N755 202 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 AQP11Q8NBQ7 271 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 DUSP18Q8NEJ0 188 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 BBS1Q8NFJ9 593 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 OR9K2Q8NGE7 335 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 OR2D3Q8NGH3 330 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 TFB1MQ8WVM0 346 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 TCTEX1D2Q8WW35 142 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 L3HYPDHQ96EM0 354 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 CENPNQ96H22 339 aaPredicted RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 FAM210BQ96KR6 192 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 PPP1R36Q96LQ0 422 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 CITED1Q99966 193 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 APOL2Q9BQE5 337 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF2Q9BSG1 426 aaPredicted RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 DPH7Q9BTV6 452 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 MCRIP2Q9BUT9 160 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 GGACTQ9BVM4 153 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 UGT2B28Q9BY64 529 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SRRQ9GZT4 340 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 FOLH1BQ9HBA9 442 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 ADAP2Q9NPF8 381 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 VAPAQ9P0L0 249 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 WARS2Q9UGM6 360 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 NUFIP1Q9UHK0 495 aaKnown RBP3.26□□□□□ -1.89
HMGB3-203ENST00000430118 SLC17A4Q9Y2C5 497 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 POLDIP2Q9Y2S7 368 aa3.26□□□□□ -1.89
HMGB3-203ENST00000430118 GOLT1BQ9Y3E0 138 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms