RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 PGA4P0DJD7 388 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 PGA3P0DJD8 388 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 B4GALT1P15291 398 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 TUBG1P23258 451 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 CD27P26842 260 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 IZUMO4Q1ZYL8 232 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 YRDCQ86U90 279 aaKnown RBP10.92□□□□□ -0.66
CDH3-202ENST00000429102 VASH2Q86V25 355 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 FBXL14Q8N1E6 418 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 SLC25A45Q8N413 288 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 ZNF799Q96GE5 643 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 ARHGAP21Q5T5U3 1957 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 A0A1W2PQD3 144 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 F8VVB4 439 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 F8VWA3 439 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 MBPP02686 304 aaPredicted RBP10.92□□□□□ -0.66
CDH3-202ENST00000429102 ZNF728P0DKX0 622 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 IGFBP7Q16270 282 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 ZNF774Q6NX45 483 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 DOK3Q7L591 496 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 TMEM156Q8N614 296 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 OR5T1Q8NG75 326 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 HIST1H2BAQ96A08 127 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 MARS2Q96GW9 593 aaKnown RBP10.92□□□□□ -0.66
CDH3-202ENST00000429102 PAPOLGQ9BWT3 736 aaKnown RBP10.92□□□□□ -0.66
CDH3-202ENST00000429102 ULBP2Q9BZM5 246 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 AK3Q9UIJ7 227 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 PI4KAP42356 2102 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 LILRA5A6NI73 299 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 TNFSF11O14788 317 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 PTAFRP25105 342 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 CCR5P51681 352 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 RPUSD3Q6P087 351 aaKnown RBP10.91□□□□□ -0.66
CDH3-202ENST00000429102 ZNF343Q6P1L6 599 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 DEGS2Q6QHC5 323 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 LYPD6Q86Y78 171 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 ST8SIA1Q92185 356 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 EMG1Q92979 244 aaKnown RBP10.91□□□□□ -0.66
CDH3-202ENST00000429102 C8orf33Q9H7E9 229 aaPredicted RBP10.91□□□□□ -0.66
CDH3-202ENST00000429102 TPRP12270 2363 aaKnown RBP10.91□□□□□ -0.66
CDH3-202ENST00000429102 PIAS2O75928 621 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 PLA2G5P39877 138 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 TAS2R46P59540 309 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 POLR2GP62487 172 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDH3-202ENST00000429102 RUNX1Q01196 453 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 PLPPR5Q32ZL2 321 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 GUSBP11Q6P575 273 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 OR6S1Q8NH40 331 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 SLC22A8Q8TCC7 542 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 CDCA3Q99618 268 aaPredicted RBP10.91□□□□□ -0.66
CDH3-202ENST00000429102 WFDC1Q9HC57 220 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 MYOTQ9UBF9 498 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 TRAV39A0A0B4J263 110 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 CD37P11049 281 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 ACKR3P25106 362 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 SRYQ05066 204 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 ACTBL2Q562R1 376 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 OR14K1Q8NGZ2 314 aa10.91□□□□□ -0.66
CDH3-202ENST00000429102 ZNF501Q96CX3 271 aaPredicted RBP10.91□□□□□ -0.66
CDH3-202ENST00000429102 MYOZ1Q9NP98 299 aaPredicted RBP10.91□□□□□ -0.66
CDH3-202ENST00000429102 CCL20P78556 96 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 PPA1Q15181 289 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 USF2Q15853 346 aaPredicted RBP10.9□□□□□ -0.66
CDH3-202ENST00000429102 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
CDH3-202ENST00000429102 PRO1933Q9H354 126 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 SLC7A11Q9UPY5 501 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 OSGIN2Q9Y236 505 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 FREM1Q5H8C1 2179 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 SSSCA1O60232 199 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 NDUFS6O75380 124 aaKnown RBP10.9□□□□□ -0.66
CDH3-202ENST00000429102 CST4P01036 141 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 GNRHRP30968 328 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 TMEM268Q5VZI3 342 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 FAHD2BQ6P2I3 314 aaPredicted RBP10.9□□□□□ -0.66
CDH3-202ENST00000429102 IL34Q6ZMJ4 242 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 BORCS8Q96FH0 119 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 FAHD2AQ96GK7 314 aa10.9□□□□□ -0.66
CDH3-202ENST00000429102 FAM212BQ9NTI7 297 aaPredicted RBP10.9□□□□□ -0.66
CDH3-202ENST00000429102 ZFHX4Q86UP3 3567 aa10.9□□□□□ -0.67
CDH3-202ENST00000429102 HLA-GP17693 338 aa10.9□□□□□ -0.67
CDH3-202ENST00000429102 GSK3AP49840 483 aa10.9□□□□□ -0.67
CDH3-202ENST00000429102 RPS16P62249 146 aaKnown RBP10.9□□□□□ -0.67
CDH3-202ENST00000429102 EIF5AP63241 154 aaKnown RBP10.9□□□□□ -0.67
CDH3-202ENST00000429102 NAT6Q93015 286 aa10.9□□□□□ -0.67
CDH3-202ENST00000429102 PTX4Q96A99 478 aa10.9□□□□□ -0.67
CDH3-202ENST00000429102 AQP10Q96PS8 301 aa10.9□□□□□ -0.67
CDH3-202ENST00000429102 MRPL13Q9BYD1 178 aaKnown RBP10.9□□□□□ -0.67
CDH3-202ENST00000429102 WBP1LQ9NX94 342 aa10.9□□□□□ -0.67
CDH3-202ENST00000429102 UBE2J1Q9Y385 318 aaPredicted RBP10.9□□□□□ -0.67
CDH3-202ENST00000429102 SPTBN2O15020 2390 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 DOCK10Q96BY6 2186 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 ZFAND5O76080 213 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 FOSL2P15408 326 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 ZNF16P17020 682 aaPredicted RBP10.89□□□□□ -0.67
CDH3-202ENST00000429102 DVL1P1P54792 670 aaPredicted RBP10.89□□□□□ -0.67
CDH3-202ENST00000429102 B2MP61769 119 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 KIAA0141Q14154 515 aaPredicted RBP10.89□□□□□ -0.67
CDH3-202ENST00000429102 VAX1Q5SQQ9 334 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 TMEM123Q8N131 208 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 ASB13Q8WXK3 278 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms