RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 PTGFRP43088 359 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 ID4P47928 161 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 DUSP3P51452 185 aaPredicted RBP7.28□□□□□ -1.24
CD44-208ENST00000428726 DHODHQ02127 395 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 ZNF273Q14593 569 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 EXT1Q16394 746 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 PLCXD3Q63HM9 321 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 NUFIP2Q7Z417 695 aaKnown RBP7.28□□□□□ -1.24
CD44-208ENST00000428726 GGNQ86UU5 652 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 FBXL14Q8N1E6 418 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 BVESQ8NE79 360 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 OR11L1Q8NGX0 322 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 CCDC107Q8WV48 283 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 MRPS24Q96EL2 167 aaKnown RBP7.28□□□□□ -1.24
CD44-208ENST00000428726 FOXB1Q99853 325 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 SYT3Q9BQG1 590 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 SLC25A21Q9BQT8 299 aaPredicted RBP7.28□□□□□ -1.24
CD44-208ENST00000428726 UQCC2Q9BRT2 126 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 ANGPTL4Q9BY76 406 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 NELFAQ9H3P2 528 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 HS3ST1O14792 307 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 NEURL1O76050 574 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 NR2C1P13056 603 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 SERPINF1P36955 418 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 GPM6AP51674 278 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 RSU1Q15404 277 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 LY6G6FQ5SQ64 297 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 FAM180AQ6UWF9 173 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 ETV3LQ6ZN32 361 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 SLC25A26Q70HW3 274 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 GJC3Q8NFK1 279 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 OR1S2Q8NGQ3 325 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 OR14K1Q8NGZ2 314 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 SCARB1Q8WTV0 552 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 TMED6Q8WW62 240 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 PNPLA2Q96AD5 504 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 NABP1Q96AH0 204 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 ZNF700Q9H0M5 742 aa7.28□□□□□ -1.24
CD44-208ENST00000428726 BET1O15155 118 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 LYZL6O75951 148 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 SCGNO76038 276 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 DIRAS3O95661 229 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 BPNT1O95861 308 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 HPNP05981 417 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 CELA3BP08861 270 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 CD59P13987 128 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 WT1P19544 449 aaPredicted RBP7.27□□□□□ -1.24
CD44-208ENST00000428726 ZP3P21754 424 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 NFYBP25208 207 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 RAC1P63000 192 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 TLE1Q04724 770 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 RBM39Q14498 530 aaKnown RBP7.27□□□□□ -1.24
CD44-208ENST00000428726 KCNMB1Q16558 191 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 HIST3H3Q16695 136 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 IZUMO4Q1ZYL8 232 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 DRAM2Q6UX65 266 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 MEX3BQ6ZN04 569 aaKnown RBP7.27□□□□□ -1.24
CD44-208ENST00000428726 CNEP1R1Q8N9A8 125 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 PXT1Q8NFP0 134 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 CPT1CQ8TCG5 803 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 HRH4Q9H3N8 390 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 MBD2Q9UBB5 411 aa7.27□□□□□ -1.24
CD44-208ENST00000428726 IGKV1-12A0A0C4DH73 117 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 MSGN1A6NI15 193 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 DISC1C4P0D8 188 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 XRCC2O43543 280 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 AGFG2O95081 481 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 PMS2P2O95744 297 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 MT-CO3P00414 261 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 IGKV1D-12P01611 117 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 ZNF84P51523 738 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 H3F3AP84243 136 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 DCAF10Q5QP82 559 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 NAXDQ8IW45 347 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 M1APQ8TC57 530 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 RDH5Q92781 318 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 SLAMF9Q96A28 289 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 MARS2Q96GW9 593 aaKnown RBP7.27□□□□□ -1.25
CD44-208ENST00000428726 TSNAXQ99598 290 aaKnown RBP7.27□□□□□ -1.25
CD44-208ENST00000428726 SHARPINQ9H0F6 387 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 OR10A2Q9H208 303 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 LIME1Q9H400 295 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 ZNF552Q9H707 407 aaPredicted RBP7.27□□□□□ -1.25
CD44-208ENST00000428726 COMMD9Q9P000 198 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 CELSR1Q9NYQ6 3014 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 FBXO24O75426 580 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 CD74P04233 296 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 B3GALT5-AS1P59052 145 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 ARG2P78540 354 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 MEF2DQ14814 521 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 MPPED2Q15777 294 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 TMEM164Q5U3C3 297 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 PEAR1Q5VY43 1037 aaPredicted RBP7.27□□□□□ -1.25
CD44-208ENST00000428726 ZNF529Q6P280 563 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 TMEM123Q8N131 208 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 TMEM251Q8N6I4 163 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 OR5L1Q8NGL2 311 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 LHFPL5Q8TAF8 219 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 ASB13Q8WXK3 278 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 AQP3Q92482 292 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms