RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 HAS2Q92819 552 aa6.59□□□□□ -1.35
LINC01108-201ENST00000427276 HOXB13Q92826 284 aaPredicted RBP6.59□□□□□ -1.35
LINC01108-201ENST00000427276 CCNL2Q96S94 520 aaPredicted RBP6.59□□□□□ -1.35
LINC01108-201ENST00000427276 ZNF160Q9HCG1 818 aa6.59□□□□□ -1.35
LINC01108-201ENST00000427276 AK3Q9UIJ7 227 aa6.59□□□□□ -1.35
LINC01108-201ENST00000427276 ZDHHC8Q9ULC8 765 aa6.59□□□□□ -1.35
LINC01108-201ENST00000427276 CLDN16Q9Y5I7 305 aa6.59□□□□□ -1.35
LINC01108-201ENST00000427276 DMRT1Q9Y5R6 373 aa6.59□□□□□ -1.35
LINC01108-201ENST00000427276 A0A087WZY1 265 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 VSTM2BA6NLU5 285 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 ZFP92A6NM28 416 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 FIGNL2A6NMB9 653 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 E5RGE8 158 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 IGHV2-5P01817 119 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 ISG15P05161 165 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 CXCL1P09341 107 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 ZNF728P0DKX0 622 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 NDUFB7P17568 137 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 DLK1P80370 383 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 RUNX1Q01196 453 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 VAX1Q5SQQ9 334 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 C9orf40Q8IXQ3 194 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 OR5AS1Q8N127 324 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 OR5T1Q8NG75 326 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 TMEM234Q8WY98 164 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 SNX22Q96L94 193 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 PECRQ9BY49 303 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 SMOC1Q9H4F8 434 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 IL23AQ9NPF7 189 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 GPR173Q9NS66 373 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 CUTCQ9NTM9 273 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 KLHL13Q9P2N7 655 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 SRPK3Q9UPE1 567 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 NSG2Q9Y328 171 aa6.59□□□□□ -1.36
LINC01108-201ENST00000427276 ARHGAP21Q5T5U3 1957 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 NUP210LQ5VU65 1888 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 KIR2DS5A0A0G2JLQ3 304 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 A0A0G2JNG1 304 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 LOC390937A0A1W2PQ73 354 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 A0A1W2PQF6 199 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 ZNF587BE7ETH6 402 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 TSTD3H0UI37 97 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 KIR2DS3K7RE56 304 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 SEMA4FO95754 770 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 MYF5P13349 255 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 G0S2P27469 103 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 HTR5AP47898 357 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 RAB11AP62491 216 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 QRFPP83859 136 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 FAM3AP98173 230 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 FOXF1Q12946 379 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 KIR2DS5Q14953 304 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 DEFB133Q30KQ1 61 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 UNQ6494/PRO21346Q6UXR6 183 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 ZNF429Q86V71 674 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 UEVLDQ8IX04 471 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 SLC22A18ASQ8N1D0 253 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 OR10S1Q8NGN2 331 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 RNASE11Q8TAA1 199 aaKnown RBP6.58□□□□□ -1.36
LINC01108-201ENST00000427276 ASB10Q8WXI3 467 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 GNRHR2Q96P88 292 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 TREM2Q9NZC2 230 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 ZNF581Q9P0T4 197 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 MCTS1Q9ULC4 181 aaKnown RBP6.58□□□□□ -1.36
LINC01108-201ENST00000427276 SLCO1B1Q9Y6L6 691 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 TRIOBPQ9H2D6 2365 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 NSG1A0A0A6YYJ2 146 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 BTBD17A6NE02 478 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 FRG2CA6NGY1 282 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 GEMIN2O14893 280 aaKnown RBP6.58□□□□□ -1.36
LINC01108-201ENST00000427276 ST8SIA3O43173 380 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 SSSCA1O60232 199 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 F10P00742 488 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 DANCRP0C864 163 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 EPHA1P21709 976 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 FCARP24071 287 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 CDX1P47902 265 aaPredicted RBP6.58□□□□□ -1.36
LINC01108-201ENST00000427276 MTCP1P56278 107 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 RPL23AP62750 156 aaKnown RBP6.58□□□□□ -1.36
LINC01108-201ENST00000427276 C17orf67Q0P5P2 114 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 HIST2H3PS2Q5TEC6 136 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 LHFPL2Q6ZUX7 228 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 LRP11Q86VZ4 500 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 CYB561D1Q8N8Q1 229 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 Q8WTZ3 238 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 LURAP1Q96LR2 239 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 NIPSNAP3BQ9BS92 247 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 RBM24Q9BX46 236 aaKnown RBP6.58□□□□□ -1.36
LINC01108-201ENST00000427276 PLEKHA2Q9HB19 425 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 GNG13Q9P2W3 67 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 HSF4Q9ULV5 492 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 COLQQ9Y215 455 aaPredicted RBP6.58□□□□□ -1.36
LINC01108-201ENST00000427276 OSGIN2Q9Y236 505 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 PIGLQ9Y2B2 252 aa6.58□□□□□ -1.36
LINC01108-201ENST00000427276 RBFOX3A6NFN3 312 aa6.57□□□□□ -1.36
LINC01108-201ENST00000427276 ALG1L2C9J202 215 aa6.57□□□□□ -1.36
LINC01108-201ENST00000427276 HSPB6O14558 160 aa6.57□□□□□ -1.36
LINC01108-201ENST00000427276 CYTIPO60759 359 aa6.57□□□□□ -1.36
LINC01108-201ENST00000427276 SPINK2P20155 84 aa6.57□□□□□ -1.36
LINC01108-201ENST00000427276 HOXA5P20719 270 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms