RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 NHLRC3Q5JS37 347 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 SPATA46Q5T0L3 261 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 SLC25A26Q70HW3 274 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 ZNF573Q86YE8 665 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 OR4D10Q8NGI6 311 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 OR8S1Q8NH09 359 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 MARS2Q96GW9 593 aaKnown RBP12.35□□□□□ -0.43
CDK3-201ENST00000425876 MED30Q96HR3 178 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 C1QTNF6Q9BXI9 259 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 SLC2A8Q9NY64 477 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 RP1L1Q8IWN7 2480 aaPredicted RBP12.35□□□□□ -0.43
CDK3-201ENST00000425876 A0A0A6YYJ9 748 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 IGHV2OR16-5A0A0B4J2B6 119 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 A0A0G2JNJ9 132 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 A0A1B0GUH1 482 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 LILRA1O75019 489 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 IL5P05113 134 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 SFTPBP07988 381 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 ZNF735P0CB33 412 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 PMELP40967 661 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 HAAOP46952 286 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 ARFRP1Q13795 201 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 PRR30Q53SZ7 412 aaPredicted RBP12.35□□□□□ -0.43
CDK3-201ENST00000425876 ACTBL2Q562R1 376 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 RNASE10Q5GAN6 216 aaKnown RBP12.35□□□□□ -0.43
CDK3-201ENST00000425876 BHLHE23Q8NDY6 225 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 OR51S1Q8NGJ8 323 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 KLF14Q8TD94 323 aaPredicted RBP12.35□□□□□ -0.43
CDK3-201ENST00000425876 DVL3Q92997 716 aaPredicted RBP12.35□□□□□ -0.43
CDK3-201ENST00000425876 S100PBPQ96BU1 408 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 ST6GAL2Q96JF0 529 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 SLC25A21Q9BQT8 299 aaPredicted RBP12.35□□□□□ -0.43
CDK3-201ENST00000425876 PKIBQ9C010 78 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 PLEKHJ1Q9NW61 149 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 ELOVL5Q9NYP7 299 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 Q9UFV3 132 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 SCP2D1Q9UJQ7 156 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 PLEKHA6Q9Y2H5 1048 aa12.35□□□□□ -0.43
CDK3-201ENST00000425876 DISC1C4P0D8 188 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 TPD52L2O43399 206 aaKnown RBP12.34□□□□□ -0.43
CDK3-201ENST00000425876 GABRR1P24046 479 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 CHATP28329 748 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 RBM11P57052 281 aaKnown RBP12.34□□□□□ -0.43
CDK3-201ENST00000425876 PSG7Q13046 419 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 FAM76BQ5HYJ3 339 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 SIGIRRQ6IA17 410 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 RTN4RL2Q86UN3 420 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 FBXL14Q8N1E6 418 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 GVQW1Q8N7I0 195 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 DRAXINQ8NBI3 349 aaPredicted RBP12.34□□□□□ -0.43
CDK3-201ENST00000425876 GIMAP1Q8WWP7 306 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 PRRT1Q99946 306 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 MICU1Q9BPX6 476 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 RTL8AQ9BWD3 113 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 TINAGL1Q9GZM7 467 aaPredicted RBP12.34□□□□□ -0.43
CDK3-201ENST00000425876 OR10A4Q9H209 315 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 OR51J1Q9H342 316 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 RHOFQ9HBH0 211 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 TINAGQ9UJW2 476 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 ZNF221Q9UK13 617 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 ST3GAL6Q9Y274 331 aa12.34□□□□□ -0.43
CDK3-201ENST00000425876 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.44
CDK3-201ENST00000425876 H3BUI4 141 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 M0QYG6 137 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 ARPC1BO15143 372 aaKnown RBP12.33□□□□□ -0.44
CDK3-201ENST00000425876 AMY2AP04746 511 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 KITLGP21583 273 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 BMP5P22003 454 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 CA6P23280 308 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 FGF12P61328 243 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 IL24Q13007 206 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 TAF9Q16594 264 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 METTL11BQ5VVY1 283 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
CDK3-201ENST00000425876 CD276Q5ZPR3 534 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 PCSK4Q6UW60 755 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 SSX8Q7RTT4 187 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 HOGA1Q86XE5 327 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 BPIFB2Q8N4F0 458 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 OR4S1Q8NGB4 309 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 SNAPC3Q92966 411 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 FBXW5Q969U6 566 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 CCDC120Q96HB5 630 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 GINS4Q9BRT9 223 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 ALX4Q9H161 411 aaPredicted RBP12.33□□□□□ -0.44
CDK3-201ENST00000425876 OR51I2Q9H344 312 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 JKAMPQ9P055 326 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 FLVCR2Q9UPI3 526 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 ZGRF1Q86YA3 2104 aa12.33□□□□□ -0.44
CDK3-201ENST00000425876 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
CDK3-201ENST00000425876 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
CDK3-201ENST00000425876 FCER2P06734 321 aa12.32□□□□□ -0.44
CDK3-201ENST00000425876 EIF2B2P49770 351 aaKnown RBP12.32□□□□□ -0.44
CDK3-201ENST00000425876 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
CDK3-201ENST00000425876 NAAAQ02083 359 aa12.32□□□□□ -0.44
CDK3-201ENST00000425876 ZNF718Q3SXZ3 478 aa12.32□□□□□ -0.44
CDK3-201ENST00000425876 VAX1Q5SQQ9 334 aa12.32□□□□□ -0.44
CDK3-201ENST00000425876 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms