RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CELA2AP08217 269 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 PATE4P0C8F1 98 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 CEBPGP53567 150 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 NHLH2Q02577 135 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 RSPO1Q2MKA7 263 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 PLXDC2Q6UX71 529 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 MEX3BQ6ZN04 569 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 CPAMD8Q8IZJ3 1885 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 PP6455Q8WZ26 134 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 TGIF2Q9GZN2 237 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 CHST5Q9GZS9 411 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 SH3BGRL3Q9H299 93 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 WFDC1Q9HC57 220 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 BORCS7-ASMTA0A0B4J1R7 106 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 hCG_1809904A0A1W2PP81 198 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A1W2PPE3 182 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A1W2PR64 198 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A1W2PRV1 198 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 CRYM-AS1A6NIL9 109 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 FOXI3A8MTJ6 420 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC33A1O00400 549 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 DHHO43323 396 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 LCATP04180 440 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 OR2B8PP59922 312 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 ENDOGQ14249 297 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 ARL6IP1Q15041 203 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC25A53Q5H9E4 307 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 RABEPKQ7Z6M1 372 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 FAM24BQ8N5W8 94 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 SGK3Q96BR1 496 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 SPACA9Q96E40 222 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 METTL9Q9H1A3 318 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 NELFAQ9H3P2 528 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 RARRES3Q9UL19 164 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 HDGFL3Q9Y3E1 203 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 E5RGE8 158 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 TXNL1O43396 289 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 GAPDHP04406 335 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 NOVA1P51513 510 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 FAM3AP98173 230 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 KCNMB1Q16558 191 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 FBXW12Q6X9E4 464 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 PPP1R3BQ86XI6 285 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 C15orf54Q8N8G6 183 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 OR11L1Q8NGX0 322 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 LILRB1Q8NHL6 650 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 TM2D1Q9BX74 207 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 ULBP2Q9BZM5 246 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 PLEKHA2Q9HB19 425 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 NIT2Q9NQR4 276 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 LUZP4Q9P127 313 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 NSG2Q9Y328 171 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 TIMM10BQ9Y5J6 103 aa6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 FAM186AA6NE01 2351 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 UMAD1C9J7I0 102 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 OMGP23515 440 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 ACKR3P25106 362 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 LSM6P62312 80 aaKnown RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 FABP9Q0Z7S8 132 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 CLINT1Q14677 625 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 HIST3H3Q16695 136 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 PIGYQ3MUY2 71 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC22A25Q6T423 547 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 KMT5CQ86Y97 462 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 CARFQ8N187 725 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 SUMF1Q8NBK3 374 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 DMBX1Q8NFW5 382 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 OR52M1Q8NGK5 317 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 FAM213BQ8TBF2 198 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 SPTSSAQ969W0 71 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 NECAP2Q9NVZ3 263 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 RFNGQ9Y644 331 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 CCDC163A0A0D9SF12 145 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 ETV2O00321 342 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 GEMIN2O14893 280 aaKnown RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 BCAT2O15382 392 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 PHF1O43189 567 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 GDF9O60383 454 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 SNCAP37840 140 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 EIF1P41567 113 aaKnown RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 SHBQ15464 509 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 TMEM182Q6ZP80 229 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 UBAC2Q8NBM4 344 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 ADPRHL1Q8NDY3 354 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC25A43Q8WUT9 341 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 BORCS8Q96FH0 119 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 Q96M66 194 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 NAA60Q9H7X0 242 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 KCNJ16Q9NPI9 418 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 C19orf12Q9NSK7 152 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 TUBD1Q9UJT1 453 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 RCL1Q9Y2P8 373 aaKnown RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 PUS1Q9Y606 427 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 V9GYS6 101 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 IGLV3-12A0A075B6K2 115 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A0U1RQV5 110 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A1W2PPE2 198 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 FAM157AC9JC47 383 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 TP53I11O14683 189 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms