RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ZBTB49Q6ZSB9 765 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 TCF23Q7RTU1 214 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 ZNF573Q86YE8 665 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 NDNFQ8TB73 568 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 THEM6Q8WUY1 208 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 ZNF714Q96N38 554 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 RBM14Q96PK6 669 aaKnown RBP13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 OR14J1Q9UGF5 321 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 POLDIP2Q9Y2S7 368 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 LYVE1Q9Y5Y7 322 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 DSCAML1Q8TD84 2053 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 FAM183AA6NL82 134 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 RIIAD1A6NNX1 92 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 J3QT63 122 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 ZNF737O75373 536 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 OR2F2O95006 317 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 IGLV3-1P01715 115 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 ZNF3P17036 446 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 BRS3P32247 399 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 ERVK11-1P61568 191 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 MEF2CQ06413 473 aaPredicted RBP13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 PLCXD3Q63HM9 321 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 OR4P4Q8NGL7 312 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 MUC7Q8TAX7 377 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 CAPSLQ8WWF8 208 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 TFAP2CQ92754 450 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 STMN2Q93045 179 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 P2RX4Q99571 388 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 ZNF649Q9BS31 505 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 SLC25A33Q9BSK2 321 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 MED20Q9H944 212 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 SPAG4Q9NPE6 437 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 SLC22A13Q9Y226 551 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 SESN1Q9Y6P5 492 aa13.29□□□□□ -0.28
CHCHD3-202ENST00000423635 MEX3AA1L020 520 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 NRASP01111 189 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 CD24P25063 80 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 MPZP25189 248 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 EDDM3BP56851 147 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 RPL23AP62750 156 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 ZNF676Q8N7Q3 588 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 CLEC7AQ9BXN2 247 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 TMEM133Q9H2Q1 129 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 ZFP57Q9NU63 452 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 ARMC1Q9NVT9 282 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 DPM3Q9P2X0 92 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 ENPP5Q9UJA9 477 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 HHLA2Q9UM44 414 aa13.28□□□□□ -0.28
CHCHD3-202ENST00000423635 PSMB11A5LHX3 300 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 TNFRSF11BO00300 401 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 GSC2O15499 205 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 DNAJC8O75937 253 aaPredicted RBP13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 DOC2BQ14184 412 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 ZNF684Q5T5D7 378 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 OR2W3Q7Z3T1 314 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 RNF148Q8N7C7 305 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 ASCC1Q8N9N2 400 aaKnown RBP13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 FAM206AQ9NX38 181 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 MAGEL2Q9UJ55 1249 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 PIGLQ9Y2B2 252 aa13.27□□□□□ -0.29
CHCHD3-202ENST00000423635 hADV38S2A0JD32 116 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 PQLC2LA1A4F0 135 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 SH2D7A6NKC9 451 aaPredicted RBP13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 M0QZK8 103 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 SELENOFO60613 162 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 CCDC22O60826 627 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 CCNB2O95067 398 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 ALOX5APP20292 161 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 GP2P55259 537 aaKnown RBP13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 TMEM42Q69YG0 159 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 DEGS2Q6QHC5 323 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 C8orf86Q6ZUL3 223 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 OR8H2Q8N162 312 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 AQP11Q8NBQ7 271 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 SNX22Q96L94 193 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 OR51V1Q9H2C8 321 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 DNAJB9Q9UBS3 223 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 KLHDC2Q9Y2U9 406 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 LINC00312Q9Y6C7 94 aa13.26□□□□□ -0.29
CHCHD3-202ENST00000423635 TMEM269A0A1B0GVZ9 245 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 SOX14O95416 240 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 H2AFXP16104 143 aaPredicted RBP13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 CHATP28329 748 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 BDH1Q02338 343 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 C18orf65Q6ZTR6 163 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 KRT77Q7Z794 578 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 ZNF329Q86UD4 541 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 BATF2Q8N1L9 274 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 OR51E1Q8TCB6 317 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 BCAS4Q8TDM0 211 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 OTULINQ96BN8 352 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 NSMCE2Q96MF7 247 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 TEAD3Q99594 435 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 ASCL2Q99929 193 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 DGCR6LQ9BY27 220 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 GPR84Q9NQS5 396 aa13.25□□□□□ -0.29
CHCHD3-202ENST00000423635 LCE6AA0A183 80 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms