RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 IGKV1D-12P01611 117 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 CD37P11049 281 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 RPL5P46777 297 aaKnown RBP14.24□□□□□ -0.13
COL7A1-202ENST00000422991 GMFBP60983 142 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 TEX36Q5VZQ5 186 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 GPR141Q7Z602 305 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 LRRC28Q86X40 367 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-202ENST00000422991 JAGN1Q8N5M9 183 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 PNLDC1Q8NA58 520 aaKnown RBP14.24□□□□□ -0.13
COL7A1-202ENST00000422991 C19orf18Q8NEA5 215 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 PXT1Q8NFP0 134 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 OR51F2Q8NH61 342 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 TNFAIP8L1Q8WVP5 186 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 CEP19Q96LK0 163 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 UQCC2Q9BRT2 126 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 CENPOQ9BU64 300 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 TMUB1Q9BVT8 246 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 HES4Q9HCC6 221 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 ABCA2Q9BZC7 2435 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 IGHV3OR15-7A0A075B7D8 119 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 IGHV4-61A0A0C4DH41 118 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 F8VVB4 439 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 F8VWA3 439 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 TRAPPC2LH3BP13 241 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 KDM4BO94953 1096 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 NXPH2O95156 264 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 TMEM225BP0DP42 221 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 CD99P14209 185 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 MUC1P15941 1255 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-202ENST00000422991 BCL3P20749 454 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 GLRA1P23415 457 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 PTGFRP43088 359 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 MTNR1BP49286 362 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 SMIM21Q3B7S5 101 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 ZNF404Q494X3 552 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 TMEM155Q4W5P6 130 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 GLT8D1Q68CQ7 371 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 SFRP4Q6FHJ7 346 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-202ENST00000422991 ASCL4Q6XD76 172 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 SLC16A12Q6ZSM3 486 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 C1QL2Q7Z5L3 287 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 FAM90A1Q86YD7 464 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 Q8IYB0 196 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 BATF2Q8N1L9 274 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 MUC20Q8N307 709 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-202ENST00000422991 SEH1LQ96EE3 360 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 KCTD7Q96MP8 289 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 REG4Q9BYZ8 158 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 FAM192AQ9GZU8 254 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 RNF167Q9H6Y7 350 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 CNTD2Q9H8S5 307 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 TMEM165Q9HC07 324 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 SMURF1Q9HCE7 757 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 RASL12Q9NYN1 266 aa14.23□□□□□ -0.13
COL7A1-202ENST00000422991 TRAV38-1A0A0B4J264 116 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 RNF223E7ERA6 249 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 NPBWR2P48146 333 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 MICBQ29980 383 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 C1orf100Q5SVJ3 147 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 ACP7Q6ZNF0 438 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 ANKRD13BQ86YJ7 626 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 SPICQ8N5J4 248 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 DEFB108BQ8NET1 73 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 OR4D6Q8NGJ1 314 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 C12orf43Q96C57 262 aaKnown RBP14.22□□□□□ -0.13
COL7A1-202ENST00000422991 FOXRED1Q96CU9 486 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-202ENST00000422991 TMEM246Q9BRR3 403 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 NARFLQ9H6Q4 476 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 RBFOX1Q9NWB1 397 aaKnown RBP14.22□□□□□ -0.13
COL7A1-202ENST00000422991 DNAJB11Q9UBS4 358 aa14.22□□□□□ -0.13
COL7A1-202ENST00000422991 MRPS28Q9Y2Q9 187 aaKnown RBP14.22□□□□□ -0.13
COL7A1-202ENST00000422991 AK6Q9Y3D8 172 aaKnown RBP14.22□□□□□ -0.13
COL7A1-202ENST00000422991 ZNF469Q96JG9 3925 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-202ENST00000422991 PDCD5O14737 125 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 GABARAPO95166 117 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 CDRT1O95170 752 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 SFTPBP07988 381 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 USF1P22415 310 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-202ENST00000422991 KCNJ8Q15842 424 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 STUMQ69YW2 141 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 CLDND2Q8NHS1 167 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 EMG1Q92979 244 aaKnown RBP14.21□□□□□ -0.13
COL7A1-202ENST00000422991 GAL3ST1Q99999 423 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 NAA50Q9GZZ1 169 aaKnown RBP14.21□□□□□ -0.13
COL7A1-202ENST00000422991 RHOFQ9HBH0 211 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 IL36GQ9NZH8 169 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 NLKQ9UBE8 527 aa14.21□□□□□ -0.13
COL7A1-202ENST00000422991 MTORP42345 2549 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 CEACAM18A8MTB9 384 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 SLC17A2O00624 439 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 SLC22A1O15245 554 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 IGHV2-5P01817 119 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 GYPAP02724 150 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 RAB3BP20337 219 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 OR10A3P58181 314 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 LSM3P62310 102 aaKnown RBP14.2□□□□□ -0.14
COL7A1-202ENST00000422991 LOXL1Q08397 574 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-202ENST00000422991 GPR107Q5VW38 600 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 AWAT2Q6E213 333 aa14.2□□□□□ -0.14
COL7A1-202ENST00000422991 FAM166AQ6J272 317 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms