RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 RRP8O43159 456 aaKnown RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 SLC25A5P05141 298 aaKnown RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 CAMPP49913 170 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 TMEM65Q6PI78 240 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 OR10AD1Q8NGE0 317 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 OR1F12Q8NHA8 337 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 ALKBH3Q96Q83 286 aaPredicted RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 DNAJB12Q9NXW2 375 aaKnown RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 PRSS50Q9UI38 385 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 FUT9Q9Y231 359 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 C1QAP02745 245 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 HEXAP06865 529 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 OR10J1P30954 320 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 PPOXP50336 477 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 ANAPC16Q96DE5 110 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 ZNF275Q9NSD4 429 aaPredicted RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 M0R1X1 148 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 GATCO43716 136 aaKnown RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 F12P00748 615 aaPredicted RBP11.02□□□□□ -0.65
CLCN4-203ENST00000421085 HES4Q9HCC6 221 aa11.02□□□□□ -0.65
CLCN4-203ENST00000421085 RER1O15258 196 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 NEURL1O76050 574 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 HRASP01112 189 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 RPS23P62266 143 aaKnown RBP11.01□□□□□ -0.65
CLCN4-203ENST00000421085 ELOBQ15370 118 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 ZNF880Q6PDB4 577 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 TOX2Q96NM4 488 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 TMEM30CPA0ZSE6 113 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 LANCL1O43813 399 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 CEACAM5P06731 702 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 P2RY1P47900 373 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 KLF9Q13886 244 aaPredicted RBP11.01□□□□□ -0.65
CLCN4-203ENST00000421085 TMEM215Q68D42 235 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 RNF165Q6ZSG1 346 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 MFNGO00587 321 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 TCF21O43680 179 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 FAM53BQ14153 422 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 CEACAM16Q2WEN9 425 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 PARM1Q6UWI2 310 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 NUFIP2Q7Z417 695 aaKnown RBP11.01□□□□□ -0.65
CLCN4-203ENST00000421085 B4DEV8 164 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 ZNF253O75346 499 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 DHRS3O75911 302 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 FUT7Q11130 342 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 MRPL58Q14197 206 aaKnown RBP11.01□□□□□ -0.65
CLCN4-203ENST00000421085 MPV17LQ2QL34 196 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 HLA-DRB5Q30154 266 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 ASB16Q96NS5 453 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 SHROOM3Q8TF72 1996 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 H3BQ15 152 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 CAPZBP47756 277 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 PPP2CBP62714 309 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 PPP2CAP67775 309 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 FAM209BQ5JX69 171 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 OR2T6Q8NHC8 308 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 CHAC2Q8WUX2 184 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 ZNF117Q03924 483 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 SMIM21Q3B7S5 101 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 OR5AU1Q8NGC0 362 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 CA10Q9NS85 328 aa11.01□□□□□ -0.65
CLCN4-203ENST00000421085 DDX60Q8IY21 1712 aaKnown RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 PLCH1Q4KWH8 1693 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 RPS4XP62701 263 aaKnown RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 IL24Q13007 206 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 Q6ZNB5 142 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 SPPL3Q8TCT6 385 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 TOPAZ1Q8N9V7 1692 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 FCGR3BO75015 233 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 NKX2-2O95096 273 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 ZGLP1P0C6A0 271 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 SUMO3P55854 103 aaPredicted RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 YBX1P67809 324 aaKnown RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 JMJD6Q6NYC1 403 aaPredicted RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 OR4C3Q8NH37 302 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 TRMT61AQ96FX7 289 aaKnown RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 ICAM5Q9UMF0 924 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 CACNA1SQ13698 1873 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 M0R1B8 84 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 MBPP02686 304 aaPredicted RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 SMIM17P0DL12 118 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 MYBPHQ13203 477 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 ALKBH6Q3KRA9 238 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 BLNKQ8WV28 456 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 FOXB1Q99853 325 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 MENTQ9BUN1 341 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 MRM2Q9UI43 246 aaKnown RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 HSF4Q9ULV5 492 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 PAM16Q9Y3D7 125 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 N4BP2Q86UW6 1770 aaPredicted RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 LRRC3CA6NJW4 275 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 OGG1O15527 345 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 TBX19O60806 448 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 RHOBP62745 196 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 TSPO2Q5TGU0 170 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 TGIF2LXQ8IUE1 241 aa11□□□□□ -0.65
CLCN4-203ENST00000421085 APOBEC3DQ96AK3 386 aaPredicted RBP11□□□□□ -0.65
CLCN4-203ENST00000421085 MANBALQ9NQG1 85 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms