RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PRDX4Q13162 271 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 TMED1Q13445 227 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 LYPD2Q6UXB3 125 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 Q6ZPA2 131 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 PLEKHG7Q6ZR37 379 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 SSX6Q7RTT6 188 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 C1QL2Q7Z5L3 287 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 COMMD2Q86X83 199 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 C11orf53Q8IXP5 236 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 C10orf67Q8IYJ2 551 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ZDHHC23Q8IYP9 409 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 GCSAMQ8N6F7 178 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 TEX29Q8N6K0 151 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 OR1M1Q8NGA1 313 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 OR8B3Q8NGG8 313 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 HPSE2Q8WWQ2 592 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM158Q8WZ71 300 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 EME1Q96AY2 570 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 FAM71F1Q96KD3 344 aaPredicted RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 OR8B2Q96RD0 313 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 MBOAT4Q96T53 435 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 APOL4Q9BPW4 351 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 MICU1Q9BPX6 476 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 RTL8AQ9BWD3 113 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 FGF23Q9GZV9 251 aaPredicted RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ABCB9Q9NP78 766 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 GPR84Q9NQS5 396 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 IMPAD1Q9NX62 359 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 NUFIP1Q9UHK0 495 aaKnown RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 OPN4Q9UHM6 478 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 MRM2Q9UI43 246 aaKnown RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 INSIG2Q9Y5U4 225 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 MPC1Q9Y5U8 109 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 R4GMQ9 66 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF816-ZNF321PA0A0X1KG74 233 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 A0A1W2PQL4 384 aaPredicted RBP5.74□□□□□ -1.49
HMGN1-205ENST00000419378 FAM90A18PA6NE21 464 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 FAM90A16PA6NEW6 464 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM210A6NLX4 147 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 FAM90A9PA6NNJ1 464 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 FAM90A5PA8MXJ8 464 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 E9PQ18 207 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 LOC110117498-PIK3R3F6TDL0 507 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 H0YIZ8 118 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 CDIPTO14735 213 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 TCF21O43680 179 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 ENTPD6O75354 484 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 LHBP01229 141 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 TTRP02766 147 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 KRT8P05787 483 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 OR2T7P0C7T2 308 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 FAM90A15PP0C7V4 464 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 FAM90A14PP0C7W9 464 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 ATP6V1E1P36543 226 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 PSMB10P40306 273 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 SUMO2P61956 95 aaKnown RBP5.74□□□□□ -1.49
HMGN1-205ENST00000419378 PAX2Q02962 417 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 SCGB2A2Q13296 93 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 KCNJ8Q15842 424 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 KRTAP24-1Q3LI83 254 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 BCL2L15Q5TBC7 163 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 TEX36Q5VZQ5 186 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 FAM90A2PQ658T7 463 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 CCDC144NLQ6NUI1 221 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 WDR82Q6UXN9 313 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 KRT74Q7RTS7 529 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 PHC2Q8IXK0 858 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 GALNT4Q8N4A0 578 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 SEMA6DQ8NFY4 1073 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 OR10H4Q8NGA5 316 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 OR2T27Q8NH04 317 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 OR51E1Q8TCB6 317 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 LRRC29Q8WV35 223 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 TRUB1Q8WWH5 349 aaKnown RBP5.74□□□□□ -1.49
HMGN1-205ENST00000419378 OR5P3Q8WZ94 311 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 PIGCQ92535 297 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 RPL3LQ92901 407 aaKnown RBP5.74□□□□□ -1.49
HMGN1-205ENST00000419378 C9orf16Q9BUW7 83 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 TLNRD1Q9H1K6 362 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 RNPEPL1Q9HAU8 725 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 MGAT4CQ9UBM8 478 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 CTSZQ9UBR2 303 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 CLN8Q9UBY8 286 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGN1-205ENST00000419378 GTF2A1LQ9UNN4 478 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 AUP1Q9Y679 476 aa5.74□□□□□ -1.49
HMGN1-205ENST00000419378 IGHV3OR15-7A0A075B7D8 119 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 TRAV38-1A0A0B4J264 116 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 IGHV2-70DA0A0C4DH43 119 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.73□□□□□ -1.49
HMGN1-205ENST00000419378 P2RY10O00398 339 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 TNFRSF13BO14836 293 aaPredicted RBP5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ADAM20O43506 726 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 SULT1C4O75897 302 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 DHRS3O75911 302 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 RPP14O95059 124 aaKnown RBP5.73□□□□□ -1.49
HMGN1-205ENST00000419378 BAG2O95816 211 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 GYPAP02724 150 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms