RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 NPY4RP50391 375 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 GABARAPL2P60520 117 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 SEC61A1P61619 476 aaKnown RBP11.12□□□□□ -0.63
TMEM248-203ENST00000418375 PPP3R1P63098 170 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 CR1LQ2VPA4 569 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 SMIM21Q3B7S5 101 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 Q499Y3 187 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 STUMQ69YW2 141 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 SLC25A26Q70HW3 274 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 CALHM1Q8IU99 346 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 MKXQ8IYA7 352 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 OR4M2Q8NGB6 313 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 THRSPQ92748 146 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 TMEM106AQ96A25 262 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 OR5M11Q96RB7 305 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 DNTTIP1Q9H147 329 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 SNTG1Q9NSN8 517 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 KAAG1Q9UBP8 84 aa11.12□□□□□ -0.63
TMEM248-203ENST00000418375 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
TMEM248-203ENST00000418375 LSM2Q9Y333 95 aaKnown RBP11.12□□□□□ -0.63
TMEM248-203ENST00000418375 YLPM1P49750 1951 aaKnown RBP11.12□□□□□ -0.63
TMEM248-203ENST00000418375 IGKV1-27A0A075B6S5 117 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 TRBV5-5A0A0J9YX44 114 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 NXPH2O95156 264 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 PLATP00750 562 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 ZFP36P26651 326 aaKnown RBP11.11□□□□□ -0.63
TMEM248-203ENST00000418375 POU3F4P49335 361 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 KRTAP24-1Q3LI83 254 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 DCAF12L2Q5VW00 463 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 WDR25Q64LD2 544 aaPredicted RBP11.11□□□□□ -0.63
TMEM248-203ENST00000418375 FAHD2BQ6P2I3 314 aaPredicted RBP11.11□□□□□ -0.63
TMEM248-203ENST00000418375 ACP7Q6ZNF0 438 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 OR5T2Q8NGG2 359 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 OR13C5Q8NGS8 318 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 UFD1Q92890 307 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 FAHD2AQ96GK7 314 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 MED30Q96HR3 178 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 CEP19Q96LK0 163 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 ZNF488Q96MN9 340 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 CCL13Q99616 98 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 NRIP2Q9BQI9 281 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 ISYNA1Q9NPH2 558 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 TAS2R4Q9NYW5 299 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
TMEM248-203ENST00000418375 J3QLI3 93 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 HSMCR30P0CW71 290 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 MAPK3P27361 379 aaPredicted RBP11.1□□□□□ -0.63
TMEM248-203ENST00000418375 GABRA2P47869 451 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMEM248-203ENST00000418375 GPR50Q13585 617 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 TBCEQ15813 527 aaPredicted RBP11.1□□□□□ -0.63
TMEM248-203ENST00000418375 ATPAF1Q5TC12 328 aaPredicted RBP11.1□□□□□ -0.63
TMEM248-203ENST00000418375 CD276Q5ZPR3 534 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 ZNF529Q6P280 563 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 BTNL3Q6UXE8 466 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 ZNF841Q6ZN19 808 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 Q8IYB0 196 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 SVOPQ8N4V2 548 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 MS4A15Q8N5U1 240 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 TEX29Q8N6K0 151 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 ANGPTL6Q8NI99 470 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 SLAMF9Q96A28 289 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 TMEM138Q9NPI0 162 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMEM248-203ENST00000418375 MALRD1Q5VYJ5 2156 aa11.1□□□□□ -0.63
TMEM248-203ENST00000418375 LOC105371242A0A075B767 164 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 ZNF879B4DU55 563 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 TRAPPC2LH3BP13 241 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 DVL1O14640 695 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 NDUFB3O43676 98 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 KNG1P01042 644 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 ALDOBP05062 364 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 PSG2P11465 335 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 MAP2K4P45985 399 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 ERVK11-1P61568 191 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 IL13RA1P78552 427 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 MLLT11Q13015 90 aaPredicted RBP11.09□□□□□ -0.63
TMEM248-203ENST00000418375 PDZK1IP1Q13113 114 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 DOC2BQ14184 412 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 KISS1Q15726 138 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 C11orf91Q3C1V1 193 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 LRRC10Q5BKY1 277 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 FIP1L1Q6UN15 594 aaKnown RBP11.09□□□□□ -0.63
TMEM248-203ENST00000418375 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 ZNF367Q7RTV3 350 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 SAXO1Q8IYX7 474 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 RFT1Q96AA3 541 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 SPACA5Q96QH8 159 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 OR14A2Q96R54 314 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 HES4Q9HCC6 221 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 MTCH1Q9NZJ7 389 aa11.09□□□□□ -0.63
TMEM248-203ENST00000418375 IGKV1D-17A0A075B6S4 117 aa11.08□□□□□ -0.64
TMEM248-203ENST00000418375 TRBV5-7A0A0A0MS05 114 aa11.08□□□□□ -0.64
TMEM248-203ENST00000418375 IGHV2-70DA0A0C4DH43 119 aa11.08□□□□□ -0.64
TMEM248-203ENST00000418375 RFPL4AA6NLU0 287 aa11.08□□□□□ -0.64
TMEM248-203ENST00000418375 RFPL4AL1F8VTS6 287 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms