RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZFPL1O95159 310 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 CEBPDP49716 269 aaPredicted RBP16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 COMPP49747 757 aaPredicted RBP16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 FUT6P51993 359 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 LRRC10Q5BKY1 277 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 XAF1Q6GPH4 301 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 KIR3DL3Q8N743 410 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 RGP1Q92546 391 aaPredicted RBP16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 JMJD8Q96S16 334 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 MS4A7Q9GZW8 240 aaPredicted RBP16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 PLEKHA1Q9HB21 404 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 NKX1-2Q9UD57 310 aaPredicted RBP16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 POLDIP2Q9Y2S7 368 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 TMEM89A2RUT3 159 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 CLDN34H7C241 214 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 GATBO75879 557 aaKnown RBP16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 GNAO1P09471 354 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 ETV1P50549 477 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 DLX1P56177 255 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 DEFB112Q30KQ8 113 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 KLHL22Q53GT1 634 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 ASPHD2Q6ICH7 369 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 PIP4P2Q8N4L2 257 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 ZNF485Q8NCK3 441 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 DNAAF1Q8NEP3 725 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 FGGYQ96C11 551 aa16.94■□□□□ 0.3
PKNOX1-202ENST00000418336 TRIM77I1YAP6 450 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 MT-ND2P03891 347 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 ATF1P18846 271 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 PRTN3P24158 256 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 PRDX2P32119 198 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 GTF2A1P52655 376 aaPredicted RBP16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 BPIFB3P59826 476 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 DOC2BQ14184 412 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 PDCD1Q15116 288 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 SLC9A3R2Q15599 337 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 SMIM21Q3B7S5 101 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 METTL11BQ5VVY1 283 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 TTC23Q5W5X9 447 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 METAP1DQ6UB28 335 aaPredicted RBP16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 VMO1Q7Z5L0 202 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 C11orf42Q8N5U0 333 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 CYGBQ8WWM9 190 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 ADI1Q9BV57 179 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 HHLA2Q9UM44 414 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 SLC7A11Q9UPY5 501 aa16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 SIRT4Q9Y6E7 314 aaPredicted RBP16.93■□□□□ 0.3
PKNOX1-202ENST00000418336 IGHV1-69DA0A0B4J2H0 117 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 RNASEK-C17orf49H0YIS7 233 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 LALBAP00709 142 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 IGHV1-69P01742 117 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 GABRA2P47869 451 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 GPR157Q5UAW9 335 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 HCP5Q6MZN7 132 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 LHX4Q969G2 390 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 SLAMF9Q96A28 289 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 DUX5Q96PT3 197 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 PDCD1LG2Q9BQ51 273 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 UNKLQ9H9P5 680 aaKnown RBP16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 C19orf12Q9NSK7 152 aa16.92■□□□□ 0.3
PKNOX1-202ENST00000418336 IGKV1-12A0A0C4DH73 117 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 ZNF737O75373 536 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 NXPH2O95156 264 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 KNG1P01042 644 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 IGKV1D-12P01611 117 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 RNASE1P07998 156 aaKnown RBP16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 AZGP1P25311 298 aaKnown RBP16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 CAPGP40121 348 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 PRB3Q04118 309 aaPredicted RBP16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 IL18R1Q13478 541 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 CNN3Q15417 329 aaKnown RBP16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 OR2G6Q5TZ20 316 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 ZNF529Q6P280 563 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 C1orf122Q6ZSJ8 110 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 SLC25A26Q70HW3 274 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 ZNF561Q8N587 486 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 DHRSXQ8N5I4 330 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 BORCS8Q96FH0 119 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 CEP19Q96LK0 163 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 IL36RNQ9UBH0 155 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 CLEC2DQ9UHP7 191 aa16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 DIMT1Q9UNQ2 313 aaKnown RBP16.91■□□□□ 0.3
PKNOX1-202ENST00000418336 H0YAE9 185 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 NDUFB7P17568 137 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 DCKP27707 260 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 NPBWR2P48146 333 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 MRPL28Q13084 256 aaKnown RBP16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 BAMBIQ13145 260 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 Q6YL49 198 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 PARP16Q8N5Y8 322 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 TMEM185AQ8NFB2 350 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 NRG4Q8WWG1 115 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 H1FXQ92522 213 aaKnown RBP16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 GGHQ92820 318 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 SEBOXQ9HB31 216 aaPredicted RBP16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 SIRT7Q9NRC8 400 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 ONECUT1Q9UBC0 465 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 HSPE1-MOB4S4R3N1 261 aa16.9■□□□□ 0.3
PKNOX1-202ENST00000418336 DSCAML1Q8TD84 2053 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 TRBV23-1A0A0A0MS06 115 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms