RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 DYSFO75923 2080 aa12.21□□□□□ -0.45
LIMS1-206ENST00000414829 CHD3Q12873 2000 aaKnown RBP12.21□□□□□ -0.46
LIMS1-206ENST00000414829 TLN2Q9Y4G6 2542 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 LOC105371242A0A075B767 164 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 IGHV3OR15-7A0A075B7D8 119 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 IGKV1-9A0A0C4DH69 117 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 KIAA1324LA8MWY0 1029 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-206ENST00000414829 SIGLEC5O15389 551 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 PHF1O43189 567 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-206ENST00000414829 IFNA2P01563 188 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 FAM157CP0CG43 387 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 SRD5A1P18405 259 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 SRP14P37108 136 aaKnown RBP12.2□□□□□ -0.46
LIMS1-206ENST00000414829 POU3F4P49335 361 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 GMFBP60983 142 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 MLLT11Q13015 90 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-206ENST00000414829 DMRTC1Q5HYR2 192 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 ZNF529Q6P280 563 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 ACP7Q6ZNF0 438 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 ZNF367Q7RTV3 350 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 ANGPTL5Q86XS5 388 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 CALHM1Q8IU99 346 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 ZNF561Q8N587 486 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 ANGPTL6Q8NI99 470 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 RGP1Q92546 391 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-206ENST00000414829 FCGR1BQ92637 280 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 WDR13Q9H1Z4 485 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
LIMS1-206ENST00000414829 LSM2Q9Y333 95 aaKnown RBP12.2□□□□□ -0.46
LIMS1-206ENST00000414829 SIRT4Q9Y6E7 314 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-206ENST00000414829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.19□□□□□ -0.46
LIMS1-206ENST00000414829 IGHV2-70DA0A0C4DH43 119 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 PNMA8CA0A1B0GUJ8 204 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 ZNF879B4DU55 563 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 DVL1O14640 695 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 TNFRSF13BO14836 293 aaPredicted RBP12.19□□□□□ -0.46
LIMS1-206ENST00000414829 SYNGR1O43759 233 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 ALDOBP05062 364 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 PPIAL4GP0DN37 164 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 CAV3P56539 151 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 ERVK11-1P61568 191 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 SEC61A1P61619 476 aaKnown RBP12.19□□□□□ -0.46
LIMS1-206ENST00000414829 PDZK1IP1Q13113 114 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 HNRNPA0Q13151 305 aaKnown RBP12.19□□□□□ -0.46
LIMS1-206ENST00000414829 KISS1Q15726 138 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 SPIN3Q5JUX0 258 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 LYPD2Q6UXB3 125 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 ZNF788Q6ZQV5 615 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 NKAIN3Q8N8D7 197 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 ZFP41Q8N8Y5 198 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 RAB40AQ8WXH6 277 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 GPER1Q99527 375 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 SMURF1Q9HCE7 757 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 PCDHB16Q9NRJ7 776 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 TAS2R4Q9NYW5 299 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
LIMS1-206ENST00000414829 IGKV1-27A0A075B6S5 117 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 TRBV23-1A0A0A0MS06 115 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 GPX5O75715 221 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 PLATP00750 562 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 PSG2P11465 335 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 ZFP36P26651 326 aaKnown RBP12.18□□□□□ -0.46
LIMS1-206ENST00000414829 BDKRB2P30411 391 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 RANBP1P43487 201 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 GABRA2P47869 451 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 DOC2BQ14184 412 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 ZNF841Q6ZN19 808 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 CDH26Q8IXH8 852 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 ST8SIA4Q92187 359 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 PHYHIPQ92561 330 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 EMG1Q92979 244 aaKnown RBP12.18□□□□□ -0.46
LIMS1-206ENST00000414829 SLAMF9Q96A28 289 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 SDSLQ96GA7 329 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 OR5M11Q96RB7 305 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 CCL13Q99616 98 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 NUDT16L1Q9BRJ7 211 aaKnown RBP12.18□□□□□ -0.46
LIMS1-206ENST00000414829 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 SEBOXQ9HB31 216 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-206ENST00000414829 SNTG1Q9NSN8 517 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 SLC25A10Q9UBX3 287 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-206ENST00000414829 FOXJ3Q9UPW0 622 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 AUP1Q9Y679 476 aa12.18□□□□□ -0.46
LIMS1-206ENST00000414829 IGKV1D-17A0A075B6S4 117 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 TRBV5-7A0A0A0MS05 114 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 A0A1W2PPH5 198 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 MEGF11A6BM72 1044 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 RFPL4AA6NLU0 287 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 RFPL4AL1F8VTS6 287 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 HSMCR30P0CW71 290 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 IKZF1Q13422 519 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 TPBGQ13641 420 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 C1QL2Q7Z5L3 287 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 CMTM4Q8IZR5 234 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 FAM216BQ8N7L0 139 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 PXT1Q8NFP0 134 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 PPP1R35Q8TAP8 253 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 NANPQ8TBE9 248 aa12.17□□□□□ -0.46
LIMS1-206ENST00000414829 TBC1D15Q8TC07 691 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms