RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 OR2Z1Q8NG97 314 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 OR56B1Q8NGI3 324 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 OR51T1Q8NGJ9 327 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 OR10R2Q8NGX6 335 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 OR13G1Q8NGZ3 307 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 OR51F2Q8NH61 342 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 SETD6Q8TBK2 473 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 AQP3Q92482 292 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 YIPF5Q969M3 257 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 MRPS24Q96EL2 167 aaKnown RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 TMEM204Q9BSN7 226 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 THAP7Q9BT49 309 aaPredicted RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 TMUB1Q9BVT8 246 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 SELENOIQ9C0D9 397 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 TLNRD1Q9H1K6 362 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 CXXC4Q9H2H0 198 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 PLK3Q9H4B4 646 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 RBFOX1Q9NWB1 397 aaKnown RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 NKIRAS2Q9NYR9 191 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 MTCH1Q9NZJ7 389 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 TAAR3PQ9P1P4 343 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 TBC1D24Q9ULP9 559 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 POLDIP2Q9Y2S7 368 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 RNF115Q9Y4L5 304 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 PCNX1Q96RV3 2341 aa5.65□□□□□ -1.51
VPS41-204ENST00000413141 HCFC1P51610 2035 aa5.65□□□□□ -1.51
VPS41-204ENST00000413141 ESPL1Q14674 2120 aa5.65□□□□□ -1.51
VPS41-204ENST00000413141 IGHV3-64DA0A0J9YX35 117 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 MEIOCA2RUB1 952 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 TMEM235A6NFC5 223 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 E7EQL1 145 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 F8VVB4 439 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 F8VWA3 439 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 TRAPPC2LH3BP13 241 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 C19orf84I3L1E1 186 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 MFNGO00587 321 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 CDIPTO14735 213 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 SOCS1O15524 211 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 AKR7A2O43488 359 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 RHBDL1O75783 438 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 PTBP3O95758 552 aaKnown RBP5.64□□□□□ -1.51
VPS41-204ENST00000413141 OR4A8P0C604 315 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 HIST1H1DP16402 221 aaKnown RBP5.64□□□□□ -1.51
VPS41-204ENST00000413141 IGFBP2P18065 325 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 GABRR1P24046 479 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 GDNFP39905 211 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ZNF81P51508 661 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 DEFA1P59665 94 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 DEFA3P59666 94 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 FGF12P61328 243 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 GUCA2AQ02747 115 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 SCN1BQ07699 218 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 MZT1Q08AG7 82 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ASAH1Q13510 395 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 DAZAP2Q15038 168 aaPredicted RBP5.64□□□□□ -1.51
VPS41-204ENST00000413141 NKPD1Q17RQ9 610 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ZNF260Q3ZCT1 412 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 NHLRC3Q5JS37 347 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 PLAC9Q5JTB6 97 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 HACD4Q5VWC8 232 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 PRAMEF6Q5VXH4 476 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 Q6ZTK2 550 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 FBXL14Q8N1E6 418 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 SCCPDHQ8NBX0 429 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 OR52I2Q8NH67 350 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 FCAMRQ8WWV6 532 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 NEUROG1Q92886 237 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 RAB3CQ96E17 227 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 PIK3IP1Q96FE7 263 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ELMOD3Q96FG2 381 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ARHGAP5-AS1Q96IT6 56 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ZNF488Q96MN9 340 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 NRIP2Q9BQI9 281 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ZMAT3Q9HA38 289 aaKnown RBP5.64□□□□□ -1.51
VPS41-204ENST00000413141 SCPEP1Q9HB40 452 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 RHOFQ9HBH0 211 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS41-204ENST00000413141 PCDHB16Q9NRJ7 776 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 IL36RNQ9UBH0 155 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 ELF5Q9UKW6 265 aaPredicted RBP5.64□□□□□ -1.51
VPS41-204ENST00000413141 ST3GAL6Q9Y274 331 aa5.64□□□□□ -1.51
VPS41-204ENST00000413141 RBMX2Q9Y388 322 aaKnown RBP5.64□□□□□ -1.51
VPS41-204ENST00000413141 ZNF462Q96JM2 2506 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A10PA6NDY2 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A18PA6NE21 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A16PA6NEW6 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A20PA6NIJ5 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A8PA6NJQ4 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A7PA6NKC0 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 A6NLC8 198 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A22PA8MWA6 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A12PA8MX19 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A5PA8MXJ8 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A23PA8MXZ1 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 M0R233 179 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 SULT1C2O00338 296 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 GEMIN2O14893 280 aaKnown RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 PLA2G10O15496 165 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 SPRY3O43610 288 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ORC5O43913 435 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms