RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 F8VWA3 439 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 H7C2Y5 167 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 RPS2P15880 293 aaKnown RBP12.04□□□□□ -0.48
NUB1-201ENST00000413040 CTRB1P17538 263 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 ADCYAP1P18509 176 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 TCN2P20062 427 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 FCGR2CP31995 323 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 ARL6IP1Q15041 203 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 FAM27BQ5VT28 67 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 GGNBP1Q5YKI7 109 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 CTRB2Q6GPI1 263 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 POC1AQ8NBT0 407 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 STOML3Q8TAV4 291 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 SULT4A1Q9BR01 284 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 PRDM6Q9NQX0 595 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 LOC102723996A0A087X1L8 192 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 RAB19A4D1S5 217 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 PVALBP20472 110 aaPredicted RBP12.04□□□□□ -0.48
NUB1-201ENST00000413040 GDF1P27539 372 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 MRPS34P82930 218 aaKnown RBP12.04□□□□□ -0.48
NUB1-201ENST00000413040 SWI5Q1ZZU3 235 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 PLCXD3Q63HM9 321 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 SLC22A25Q6T423 547 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 MEX3BQ6ZN04 569 aaKnown RBP12.04□□□□□ -0.48
NUB1-201ENST00000413040 LDLRAD3Q86YD5 345 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 OR4A4PQ8NGN8 299 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 ABHD3Q8WU67 409 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 ZNF845Q96IR2 970 aaPredicted RBP12.04□□□□□ -0.48
NUB1-201ENST00000413040 Q96M66 194 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 FOXB1Q99853 325 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 ANAPC10Q9UM13 185 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 ST3GAL6Q9Y274 331 aa12.04□□□□□ -0.48
NUB1-201ENST00000413040 IGKV1-27A0A075B6S5 117 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 SLC33A1O00400 549 aaPredicted RBP12.03□□□□□ -0.48
NUB1-201ENST00000413040 OR5AC1P0C628 307 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 RAC3P60763 192 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 SPAG16Q8N0X2 631 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 RTN4IP1Q8WWV3 396 aaPredicted RBP12.03□□□□□ -0.48
NUB1-201ENST00000413040 AIFM2Q9BRQ8 373 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 RHOFQ9HBH0 211 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 MED19A0JLT2 244 aaPredicted RBP12.03□□□□□ -0.48
NUB1-201ENST00000413040 HSPB6O14558 160 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 CCL2P13500 99 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 ZNF708P17019 499 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 CD80P33681 288 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 MLF1P58340 268 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 CNN3Q15417 329 aaKnown RBP12.03□□□□□ -0.48
NUB1-201ENST00000413040 OR10D3Q8NH80 312 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 CNTNAP3Q9BZ76 1288 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 ZNF700Q9H0M5 742 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 LIME1Q9H400 295 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 FBXL17Q9UF56 701 aa12.03□□□□□ -0.48
NUB1-201ENST00000413040 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
NUB1-201ENST00000413040 A0A096LPE4 126 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 A0A1W2PPZ6 126 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 PMS2P1A4D2B8 440 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 GJE1A6NN92 205 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 FGF16O43320 207 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 ZNF133P52736 654 aaPredicted RBP12.02□□□□□ -0.48
NUB1-201ENST00000413040 SUCLG1P53597 346 aaKnown RBP12.02□□□□□ -0.48
NUB1-201ENST00000413040 PSG4Q00888 419 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 RAB35Q15286 201 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 ZNF239Q16600 458 aaKnown RBP12.02□□□□□ -0.48
NUB1-201ENST00000413040 EIF5AL1Q6IS14 154 aaKnown RBP12.02□□□□□ -0.48
NUB1-201ENST00000413040 UQCC3Q6UW78 93 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 TM2D1Q9BX74 207 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 SLC5A7Q9GZV3 580 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 P4HTMQ9NXG6 502 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 LPAR3Q9UBY5 353 aa12.02□□□□□ -0.48
NUB1-201ENST00000413040 CEACAM18A8MTB9 384 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 OTX1P32242 354 aaPredicted RBP12.02□□□□□ -0.49
NUB1-201ENST00000413040 NAAAQ02083 359 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 ZNF92Q03936 586 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 PJVKQ0ZLH3 352 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 NEK7Q8TDX7 302 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 AQP10Q96PS8 301 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 SLC7A11Q9UPY5 501 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 IGLV3-1P01715 115 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 HKR1P10072 659 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 LPAR6P43657 344 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 NPBWR1P48145 328 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 ASCL1P50553 236 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 TMEM33P57088 247 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 EIF5AP63241 154 aaKnown RBP12.02□□□□□ -0.49
NUB1-201ENST00000413040 ZNF616Q08AN1 781 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 LYZL2Q7Z4W2 148 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 C5orf24Q7Z6I8 188 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 OR11L1Q8NGX0 322 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 M1APQ8TC57 530 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 SPSB1Q96BD6 273 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 MARS2Q96GW9 593 aaKnown RBP12.02□□□□□ -0.49
NUB1-201ENST00000413040 UQCC1Q9NVA1 299 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 TMEM38BQ9NVV0 291 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 NECAP2Q9NVZ3 263 aa12.02□□□□□ -0.49
NUB1-201ENST00000413040 MUC3AQ02505 3323 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms