RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TBC1D15Q8TC07 691 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 C10orf105Q8TEF2 133 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 ISOC1Q96CN7 298 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 CEP19Q96LK0 163 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 ASH1LQ9NR48 2969 aaKnown RBP12.78□□□□□ -0.36
LSM5-207ENST00000410044 MRPS28Q9Y2Q9 187 aaKnown RBP12.78□□□□□ -0.36
LSM5-207ENST00000410044 ITPR2Q14571 2701 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 PPIAL4EA0A075B759 164 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 PPIAL4DF5H284 164 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 TRAPPC2LH3BP13 241 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 AIPO00170 330 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 LGALS8O00214 317 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 TNFRSF13BO14836 293 aaPredicted RBP12.77□□□□□ -0.37
LSM5-207ENST00000410044 AKR7A2O43488 359 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 ANGPTL7O43827 346 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 UBBP0CG47 229 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 PPIAL4FP0DN26 164 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 MUC1P15941 1255 aaPredicted RBP12.77□□□□□ -0.37
LSM5-207ENST00000410044 EGR1P18146 543 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 GLRA1P23415 457 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 BMXP51813 675 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 MXD1Q05195 221 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 GPR176Q14439 515 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 GLIPR1L1Q6UWM5 242 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 ACP7Q6ZNF0 438 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
LSM5-207ENST00000410044 LRRC28Q86X40 367 aaPredicted RBP12.77□□□□□ -0.37
LSM5-207ENST00000410044 KRTAP1-3Q8IUG1 177 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 FAM168AQ92567 244 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 RAB1CQ92928 201 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 SLAMF9Q96A28 289 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.37
LSM5-207ENST00000410044 DGCR14Q96DF8 476 aaKnown RBP12.77□□□□□ -0.37
LSM5-207ENST00000410044 POM121Q96HA1 1249 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 METTL9Q9H1A3 318 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 TMEM165Q9HC07 324 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 SMURF1Q9HCE7 757 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 PCDHB16Q9NRJ7 776 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 FBLN5Q9UBX5 448 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 STEAP1Q9UHE8 339 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 ING4Q9UNL4 249 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 PPIAL4AQ9Y536 164 aa12.77□□□□□ -0.37
LSM5-207ENST00000410044 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
LSM5-207ENST00000410044 TRAV38-1A0A0B4J264 116 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 A6NHS1 94 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 F8VVB4 439 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 F8VWA3 439 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 H3BMQ9 156 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 PLATP00750 562 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 IGHV2-70P01814 119 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 SFTPBP07988 381 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 BCL3P20749 454 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 RBMXP38159 391 aaKnown RBP12.76□□□□□ -0.37
LSM5-207ENST00000410044 NPBWR2P48146 333 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 SERPINB10P48595 397 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 CAPZA1P52907 286 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 SPCS2Q15005 226 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 RAB11BQ15907 218 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 DGUOKQ16854 277 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 ATPAF1Q5TC12 328 aaPredicted RBP12.76□□□□□ -0.37
LSM5-207ENST00000410044 AWAT2Q6E213 333 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 SFXN4Q6P4A7 337 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 SLC25A46Q96AG3 418 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 MRPS24Q96EL2 167 aaKnown RBP12.76□□□□□ -0.37
LSM5-207ENST00000410044 TIMD4Q96H15 378 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 ZNF488Q96MN9 340 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 S100A13Q99584 98 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 NKX3-1Q99801 234 aaPredicted RBP12.76□□□□□ -0.37
LSM5-207ENST00000410044 WDR13Q9H1Z4 485 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 DCSTAMPQ9H295 470 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 PLGRKTQ9HBL7 147 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 HMG20AQ9NP66 347 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 BATF3Q9NR55 127 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
LSM5-207ENST00000410044 WIPI2Q9Y4P8 454 aa12.76□□□□□ -0.37
LSM5-207ENST00000410044 OOEPA6NGQ2 149 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 WNT9BO14905 357 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 LDLRAD4O15165 306 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 PPIHO43447 177 aaKnown RBP12.75□□□□□ -0.37
LSM5-207ENST00000410044 NDUFA2O43678 99 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 NOL3O60936 208 aaKnown RBP12.75□□□□□ -0.37
LSM5-207ENST00000410044 BPNT1O95861 308 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 CPT2P23786 658 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 GPR6P46095 362 aaPredicted RBP12.75□□□□□ -0.37
LSM5-207ENST00000410044 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
LSM5-207ENST00000410044 CAV3P56539 151 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 SCAND1P57086 179 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 FGF12P61328 243 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 BTG1P62324 171 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 QRFPP83859 136 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 HNRNPA0Q13151 305 aaKnown RBP12.75□□□□□ -0.37
LSM5-207ENST00000410044 ZMYND11Q15326 602 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 RSU1Q15404 277 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 ZNF404Q494X3 552 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 NHLRC3Q5JS37 347 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 FAM201AQ5SY85 155 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms