RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SLC36A1Q7Z2H8 476 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 ANGPTL6Q8NI99 470 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 TMEM106AQ96A25 262 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 ZNF488Q96MN9 340 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 RASSF4Q9H2L5 321 aa16.51■□□□□ 0.23
PDLIM2-207ENST00000409417 TRBV5-5A0A0J9YX44 114 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 PNMA8CA0A1B0GUJ8 204 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 DVL1O14640 695 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 AMY2BP19961 511 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 RPS11P62280 158 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 PAX2Q02962 417 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 C11orf91Q3C1V1 193 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 SLC25A26Q70HW3 274 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 OR5M11Q96RB7 305 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 HES4Q9HCC6 221 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 SMURF1Q9HCE7 757 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 MTCH1Q9NZJ7 389 aa16.5■□□□□ 0.23
PDLIM2-207ENST00000409417 IGKV1D-17A0A075B6S4 117 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 LOC105371242A0A075B767 164 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 NXPH2O95156 264 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 PLATP00750 562 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 PSG2P11465 335 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 RAB3AP20336 220 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 Q499Y3 187 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 CD276Q5ZPR3 534 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 ZNF788Q6ZQV5 615 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 OR13C5Q8NGS8 318 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 RAB40AQ8WXH6 277 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 DACT3Q96B18 629 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 MED30Q96HR3 178 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 CEP19Q96LK0 163 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 TMPRSS13Q9BYE2 586 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 CCDC90BQ9GZT6 254 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 INSIG2Q9Y5U4 225 aa16.49■□□□□ 0.23
PDLIM2-207ENST00000409417 IGHV2-70DA0A0C4DH43 119 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 NKX6-3A6NJ46 265 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 FAM157CP0CG43 387 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 EEF1B2P24534 225 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 POU3F4P49335 361 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 PDZK1IP1Q13113 114 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 MED22Q15528 200 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 ASPHD2Q6ICH7 369 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 IL17RELQ6ZVW7 336 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 MKXQ8IYA7 352 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 FAM216BQ8N7L0 139 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 SLAMF9Q96A28 289 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 POM121Q96HA1 1249 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 C7orf69Q9H7B7 122 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 ZNF222Q9UK12 451 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 KIR2DS1A0A191URI9 304 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 A0A1B0GW55 424 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 SIGLEC5O15389 551 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 FCN3O75636 299 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 CYB5AP00167 134 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 AVPP01185 164 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 HCKP08631 526 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4L2P0CJ85 424 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4L3P0CJ86 424 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4L4P0CJ87 422 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4L5P0CJ88 424 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4L6P0CJ89 424 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4L7P0CJ90 424 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 IL13RA1P78552 427 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4L9Q6RFH8 374 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 BTNL3Q6UXE8 466 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 C1orf229Q6ZS94 237 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 Q8IYB0 196 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 TEX29Q8N6K0 151 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 OR51A2Q8NGJ7 313 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 GAFA1Q96PS6 74 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 SPACA5Q96QH8 159 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 TAS2R4Q9NYW5 299 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 DUX4Q9UBX2 424 aa16.48■□□□□ 0.23
PDLIM2-207ENST00000409417 RFPL4AA6NLU0 287 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 C22orf46C9J442 243 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 RFPL4AL1F8VTS6 287 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 F8VVB4 439 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 F8VWA3 439 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 GPR37O15354 613 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 NDUFB3O43676 98 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 ECDO95905 644 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 SRD5A1P18405 259 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 GABRA2P47869 451 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 PAX8Q06710 450 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 IKZF1Q13422 519 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 GPR50Q13585 617 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 KISS1Q15726 138 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 LRRC10Q5BKY1 277 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 CRIP3Q6Q6R5 217 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 BATF2Q8N1L9 274 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 ST8SIA4Q92187 359 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 CPNE2Q96FN4 548 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 SDSLQ96GA7 329 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 OR14A2Q96R54 314 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 NUDT16L1Q9BRJ7 211 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 YTHDF1Q9BYJ9 559 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 OPN4Q9UHM6 478 aa16.47■□□□□ 0.23
PDLIM2-207ENST00000409417 TRBV5-7A0A0A0MS05 114 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 MAGEB3O15480 346 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 SPRY1O43609 319 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms