RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 RBFOX2O43251 390 aaKnown RBP eCLIP12.49□□□□□ -0.41
AFF3-202ENST00000409236 ADAM20O43506 726 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 HAAOP46952 286 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 COMPP49747 757 aaPredicted RBP12.49□□□□□ -0.41
AFF3-202ENST00000409236 XKR7Q5GH72 579 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
AFF3-202ENST00000409236 PAQR6Q6TCH4 344 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 CTNSO60931 367 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 CD68P34810 354 aaPredicted RBP12.49□□□□□ -0.41
AFF3-202ENST00000409236 SLC19A1P41440 591 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 C20orf141Q9NUB4 165 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 VAX2Q9UIW0 290 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 OR4C45A6NMZ5 311 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 SMAD6O43541 496 aaKnown RBP12.49□□□□□ -0.41
AFF3-202ENST00000409236 PBOV1Q9GZY1 135 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 LHFPL5Q8TAF8 219 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 ZNF502Q8TBZ5 544 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 C12orf49Q9H741 205 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 COA3Q9Y2R0 106 aaPredicted RBP12.49□□□□□ -0.41
AFF3-202ENST00000409236 RAXQ9Y2V3 346 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 ANK1P16157 1881 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 HEPACAM2A8MVW5 462 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 ZNF195O14628 629 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 IL4P05112 153 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 LIPFP07098 398 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 KLF3P57682 345 aaPredicted RBP12.49□□□□□ -0.41
AFF3-202ENST00000409236 TMEM140Q9NV12 185 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 NPTNQ9Y639 398 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 ALPK2Q86TB3 2170 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 NCOR1O75376 2440 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 KNDC1Q76NI1 1749 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 CSNK1DP48730 415 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 C1orf61Q13536 156 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 CCR2P41597 374 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 TAAR2Q9P1P5 351 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 GJB5O95377 273 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 PCSK6P29122 969 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 ISL1P61371 349 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 DHRS2Q13268 280 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 FAAP20Q6NZ36 180 aa12.49□□□□□ -0.41
AFF3-202ENST00000409236 MPC2O95563 127 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 ST8SIA1Q92185 356 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 NCMAPQ5T1S8 102 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 SPRYD7Q5W111 196 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 SFTPA2Q8IWL1 248 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 SFTPA1Q8IWL2 248 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 EDN1P05305 212 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 CD70P32970 193 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 ZXDAP98168 799 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 SSX8Q7RTT4 187 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 FADS6Q8N9I5 356 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 LEUTXA8MZ59 168 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 GFRA2O00451 464 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 TRILQ7L0X0 811 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 IP6K3Q96PC2 410 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
AFF3-202ENST00000409236 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
AFF3-202ENST00000409236 RER1O15258 196 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 ZNF260Q3ZCT1 412 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 YIPF6Q96EC8 236 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 TYMSP04818 313 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 SMIM13P0DJ93 91 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 CACNG5Q9UF02 275 aa12.48□□□□□ -0.41
AFF3-202ENST00000409236 MASP2O00187 686 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 SIX1Q15475 284 aaPredicted RBP12.47□□□□□ -0.41
AFF3-202ENST00000409236 ZNF788Q6ZQV5 615 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 LILRA2Q8N149 483 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 RDH5Q92781 318 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 ATOH8Q96SQ7 321 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 FABP5Q01469 135 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 ZADH2Q8N4Q0 377 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 AUNIPQ9H7T9 357 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 SLC25A19Q9HC21 320 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 MRPL16Q9NX20 251 aaKnown RBP12.47□□□□□ -0.41
AFF3-202ENST00000409236 GHRHP01286 108 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 BTG2P78543 158 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 NUFIP2Q7Z417 695 aaKnown RBP12.47□□□□□ -0.41
AFF3-202ENST00000409236 PRELID3AQ96N28 172 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 PHLPP1O60346 1717 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 FNDC7Q5VTL7 733 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 TCEAL8Q8IYN2 117 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 DDA1Q9BW61 102 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 GLIPR2Q9H4G4 154 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 TBX21Q9UL17 535 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 MRC1P22897 1456 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 PRSS37A4D1T9 235 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 ZNF98A6NK75 572 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 PLPPR5Q32ZL2 321 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 COX20Q5RI15 118 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 TWSG1Q9GZX9 223 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 GPX5O75715 221 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 ACRP10323 421 aa12.47□□□□□ -0.41
AFF3-202ENST00000409236 TRIOBPQ9H2D6 2365 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms