RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 UQCC1Q9NVA1 299 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 PATE3B3GLJ2 98 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 LRP3O75074 770 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
MSH2-202ENST00000406134 SFTPBP07988 381 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 TMEM187Q14656 261 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 RAET1LQ5VY80 246 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 ABLIM2Q6H8Q1 611 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 BRICD5Q6PL45 260 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 PRDM6Q9NQX0 595 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 TMEM38BQ9NVV0 291 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 HSF4Q9ULV5 492 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 hCG_38984A0A1B0GV85 526 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 KNG1P01042 644 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 IFNA2P01563 188 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 CPT2P23786 658 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 RAC1P63000 192 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 SCRN3Q0VDG4 424 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 ZNF585AQ6P3V2 769 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 MAML2Q8IZL2 1156 aaPredicted RBP8.53□□□□□ -1.04
MSH2-202ENST00000406134 MAFAQ8NHW3 353 aaPredicted RBP8.53□□□□□ -1.04
MSH2-202ENST00000406134 REEP6Q96HR9 211 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 C18orf12Q96KH6 178 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 NECAB3Q96P71 396 aaPredicted RBP8.53□□□□□ -1.04
MSH2-202ENST00000406134 WNT5BQ9H1J7 359 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 ZNF629Q9UEG4 869 aaPredicted RBP8.53□□□□□ -1.04
MSH2-202ENST00000406134 TRAV20A0A0B4J274 112 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 TP53I11O14683 189 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 NFYBP25208 207 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 SULT1A2P50226 295 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 PJVKQ0ZLH3 352 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 RAB35Q15286 201 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 GGNBP1Q5YKI7 109 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 CLEC9AQ6UXN8 241 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 MSI2Q96DH6 328 aaKnown RBP8.53□□□□□ -1.04
MSH2-202ENST00000406134 CRLF2Q9HC73 371 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 SLC39A1Q9NY26 324 aa8.53□□□□□ -1.04
MSH2-202ENST00000406134 RP1L1Q8IWN7 2480 aaPredicted RBP8.53□□□□□ -1.04
MSH2-202ENST00000406134 MEX3AA1L020 520 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNF98A6NK75 572 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 GEMIN2O14893 280 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 YKT6O15498 198 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 EIF1BO60739 113 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 MMP7P09237 267 aaPredicted RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 CAV2P51636 162 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 FAM3AP98173 230 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 PSG4Q00888 419 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 PPA1Q15181 289 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 TAF9Q16594 264 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 TSPO2Q5TGU0 170 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 IL34Q6ZMJ4 242 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ODF3L1Q8IXM7 274 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 HS3ST6Q96QI5 342 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 SEC11CQ9BY50 192 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ULBP2Q9BZM5 246 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNF701Q9NV72 531 aaPredicted RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 PLEK2Q9NYT0 353 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 PTRH2Q9Y3E5 179 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 VAMP5O95183 116 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 MBPP02686 304 aaPredicted RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 CST2P09228 141 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 SSR4P51571 173 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 UCP2P55851 309 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNF92Q03936 586 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 AIMP2Q13155 320 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 ETV3LQ6ZN32 361 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 CALHM1Q8IU99 346 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 OR2Y1Q8NGV0 311 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 AKR7LQ8NHP1 331 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ALKBH3Q96Q83 286 aaPredicted RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ESRP2Q9H6T0 727 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 FBXL17Q9UF56 701 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNF175Q9Y473 711 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 DSPP15924 2871 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNF503-AS2A6NEH8 195 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNF705EA8MWA4 302 aaPredicted RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 NPIPA2E9PIF3 369 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 NPIPA3F8WFD2 350 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNF32P17041 273 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 OPRM1P35372 400 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 RPS18P62269 152 aaKnown RBP8.52□□□□□ -1.05
MSH2-202ENST00000406134 EXT1Q16394 746 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 OPN5Q6U736 354 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 PLXDC2Q6UX71 529 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 PPP1R32Q7Z5V6 425 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 LRTM2Q8N967 370 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 RHOFQ9HBH0 211 aa8.52□□□□□ -1.05
MSH2-202ENST00000406134 ZNHIT1O43257 154 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 PDGFBP01127 241 aaPredicted RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR8U9P0C7N5 309 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 B4GALT1P15291 398 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR3A2P47893 321 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR8B8Q15620 311 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 SP6Q3SY56 376 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 CHRFAM7AQ494W8 412 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 ZNF100Q8IYN0 542 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms