RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 DMRTC1Q5HYR2 192 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 GALNTL5Q7Z4T8 443 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 KDF1Q8NAX2 398 aaPredicted RBP17.32■□□□□ 0.36
CCDC47-202ENST00000403162 OR10G3Q8NGC4 313 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 OR8U1Q8NH10 309 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 S100A13Q99584 98 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 WDR77Q9BQA1 342 aaPredicted RBP17.32■□□□□ 0.36
CCDC47-202ENST00000403162 ARV1Q9H2C2 271 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 ZNF160Q9HCG1 818 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 HDGFL3Q9Y3E1 203 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 TLX3O43711 291 aaPredicted RBP17.31■□□□□ 0.36
CCDC47-202ENST00000403162 FCGR2AP12318 317 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 NR2C1P13056 603 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 ZNF133P52736 654 aaPredicted RBP17.31■□□□□ 0.36
CCDC47-202ENST00000403162 IL11RAQ14626 422 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 SWI5Q1ZZU3 235 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 GGNBP1Q5YKI7 109 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 COMMD1Q8N668 190 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 OR9K2Q8NGE7 335 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 STARD10Q9Y365 291 aa17.31■□□□□ 0.36
CCDC47-202ENST00000403162 DHRS7CA6NNS2 312 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 PRSS44E7EML9 344 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 ID4P47928 161 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 CDCP2Q5VXM1 449 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 C10orf35Q96D05 121 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 AKR1E2Q96JD6 320 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 COL27A1Q8IZC6 1860 aaPredicted RBP17.3■□□□□ 0.36
CCDC47-202ENST00000403162 NCOA6Q14686 2063 aaPredicted RBP17.3■□□□□ 0.36
CCDC47-202ENST00000403162 SPAARA0A1B0GVQ0 90 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 MT-CO3P00414 261 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 FGF5P12034 268 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 FAHP16930 419 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 MSR1P21757 451 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 PTAFRP25105 342 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 FKBP2P26885 142 aaKnown RBP17.3■□□□□ 0.36
CCDC47-202ENST00000403162 RNF212Q495C1 297 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 NKAIN1Q4KMZ8 207 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 FAM69BQ5VUD6 431 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 C6orf201Q7Z4U5 140 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 GJC3Q8NFK1 279 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 MRPL24Q96A35 216 aaKnown RBP17.3■□□□□ 0.36
CCDC47-202ENST00000403162 FAM212BQ9NTI7 297 aaPredicted RBP17.3■□□□□ 0.36
CCDC47-202ENST00000403162 MYOTQ9UBF9 498 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 EDARQ9UNE0 448 aa17.3■□□□□ 0.36
CCDC47-202ENST00000403162 PCNX2A6NKB5 2137 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 HGFACQ04756 655 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 SLC38A9Q8NBW4 561 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 CCDC54Q8NEL0 328 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 LILRB1Q8NHL6 650 aaPredicted RBP17.29■□□□□ 0.36
CCDC47-202ENST00000403162 C14orf79Q96F83 325 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 Q96M66 194 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 PADI1Q9ULC6 663 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 LOXL2Q9Y4K0 774 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 EIF3GO75821 320 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC47-202ENST00000403162 KLK2P20151 261 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 SFTPDP35247 375 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 UCP2P55851 309 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 HES3Q5TGS1 186 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 RPUSD3Q6P087 351 aaKnown RBP17.29■□□□□ 0.36
CCDC47-202ENST00000403162 SECTM1Q8WVN6 248 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 HIST1H2BAQ96A08 127 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 CLCC1Q96S66 551 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 NELFAQ9H3P2 528 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 PLEKHJ1Q9NW61 149 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 ANXA10Q9UJ72 324 aa17.29■□□□□ 0.36
CCDC47-202ENST00000403162 LSM5Q9Y4Y9 91 aaKnown RBP17.29■□□□□ 0.36
CCDC47-202ENST00000403162 C1orf196B1AJZ1 125 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 E5RGE8 158 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 OR2J2O76002 312 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 ZFAND5O76080 213 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 OTX1P32242 354 aaPredicted RBP17.28■□□□□ 0.36
CCDC47-202ENST00000403162 SNCAP37840 140 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 EIF1P41567 113 aaKnown RBP17.28■□□□□ 0.36
CCDC47-202ENST00000403162 GUCA1AP43080 201 aaPredicted RBP17.28■□□□□ 0.36
CCDC47-202ENST00000403162 CLDN17P56750 224 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 SLC35A1P78382 337 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 ENDOGQ14249 297 aaKnown RBP17.28■□□□□ 0.36
CCDC47-202ENST00000403162 TMEM176BQ3YBM2 270 aaPredicted RBP17.28■□□□□ 0.36
CCDC47-202ENST00000403162 C10orf128Q5T292 105 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 FOXL2NBQ6ZUU3 175 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 DTX1Q86Y01 620 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 FADS6Q8N9I5 356 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 ELL3Q9HB65 397 aaPredicted RBP17.28■□□□□ 0.36
CCDC47-202ENST00000403162 PIGLQ9Y2B2 252 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 NSG2Q9Y328 171 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 F5H5K5 113 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 TSPAN15O95858 294 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 ACAA1P09110 424 aaPredicted RBP17.28■□□□□ 0.36
CCDC47-202ENST00000403162 SEC11BP0C7V7 166 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 FTH1P19P0C7X4 201 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 HIST1H3AP68431 136 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 HIST2H3PS2Q5TEC6 136 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 HIST2H3AQ71DI3 136 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 SLC22A8Q8TCC7 542 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 ERGIC1Q969X5 290 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 PIGQQ9BRB3 760 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 CRB3Q9BUF7 120 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 SMIM3Q9BZL3 60 aa17.28■□□□□ 0.36
CCDC47-202ENST00000403162 RIF1Q5UIP0 2472 aaKnown RBP17.27■□□□□ 0.36
CCDC47-202ENST00000403162 B4E171 279 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms