RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 S100A9P06702 114 aaKnown RBP18.31■□□□□ 0.52
CTCF-202ENST00000401394 ZNF43P17038 809 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 EIF1P41567 113 aaKnown RBP18.31■□□□□ 0.52
CTCF-202ENST00000401394 ZNF41P51814 821 aaPredicted RBP18.31■□□□□ 0.52
CTCF-202ENST00000401394 PIGYQ3MUY2 71 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 SGPP2Q8IWX5 399 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 AK3Q9UIJ7 227 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 COL6A3P12111 3177 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 A0A1B0GX78 115 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 ONECUT2O95948 504 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 SLC25A47Q6Q0C1 308 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 ST8SIA1Q92185 356 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 EGLN1Q9GZT9 426 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 METTL7AQ9H8H3 244 aa18.31■□□□□ 0.52
CTCF-202ENST00000401394 LY86O95711 162 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 PET100P0DJ07 73 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 HAGHQ16775 308 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 RPUSD3Q6P087 351 aaKnown RBP18.3■□□□□ 0.52
CTCF-202ENST00000401394 PIGQQ9BRB3 760 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 MAGT1Q9H0U3 335 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 IGKV1-27A0A075B6S5 117 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 NUDT19A8MXV4 375 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 C10orf142B7Z368 130 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 CCR5P51681 352 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 S100A13Q99584 98 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 RBM24Q9BX46 236 aaKnown RBP18.3■□□□□ 0.52
CTCF-202ENST00000401394 ZFHX4Q86UP3 3567 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 JTBO76095 146 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 PTGDSP41222 190 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 TAS2R46P59540 309 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 Q6ZPA2 131 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 LINC00469Q8N7U9 141 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 TCEAL3Q969E4 200 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 PARPBPQ9NWS1 579 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 TINAGQ9UJW2 476 aa18.3■□□□□ 0.52
CTCF-202ENST00000401394 SCGNO76038 276 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 ACTBL2Q562R1 376 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 EIF5AL1Q6IS14 154 aaKnown RBP18.29■□□□□ 0.52
CTCF-202ENST00000401394 DOK3Q7L591 496 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 C19orf12Q9NSK7 152 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 IGHV1OR15-9A0A0B4J2B8 117 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 C2CD4DB7Z1M9 353 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 MT-ND4LP03901 98 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 LTBRP36941 435 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 ANKRD37Q7Z713 158 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 ZNF565Q8N9K5 539 aa18.29■□□□□ 0.52
CTCF-202ENST00000401394 ZFP62Q8NB50 900 aaPredicted RBP18.29■□□□□ 0.52
CTCF-202ENST00000401394 RTN4IP1Q8WWV3 396 aaPredicted RBP18.29■□□□□ 0.52
CTCF-202ENST00000401394 CDCA3Q99618 268 aaPredicted RBP18.29■□□□□ 0.52
CTCF-202ENST00000401394 FAM24AA6NFZ4 105 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 CRYM-AS1A6NIL9 109 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 ZNF726A6NNF4 738 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 FOLR2P14207 255 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 MTCP1P56278 107 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 ZNF501Q96CX3 271 aaPredicted RBP18.28■□□□□ 0.52
CTCF-202ENST00000401394 ZNF251Q9BRH9 671 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 MEMO1Q9Y316 297 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 KPTNQ9Y664 436 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 IFITM10A6NMD0 228 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 GEMIN2O14893 280 aaKnown RBP18.28■□□□□ 0.52
CTCF-202ENST00000401394 DANCRP0C864 163 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 ZNF561Q8N587 486 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 HPSE2Q8WWQ2 592 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 SEBOXQ9HB31 216 aaPredicted RBP18.28■□□□□ 0.52
CTCF-202ENST00000401394 ANXA10Q9UJ72 324 aa18.28■□□□□ 0.52
CTCF-202ENST00000401394 CSNK1A1P48729 337 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 NFAM1Q8NET5 270 aaPredicted RBP18.27■□□□□ 0.52
CTCF-202ENST00000401394 SDHAF3Q9NRP4 125 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 TAAR5O14804 337 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 IFNA21P01568 189 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 IGHV2-5P01817 119 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 HEXBP07686 556 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 GFI1BQ5VTD9 330 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 MYPOPQ86VE0 399 aaPredicted RBP18.27■□□□□ 0.52
CTCF-202ENST00000401394 C17orf78Q8N4C9 275 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 RHBDD1Q8TEB9 315 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 NTNG2Q96CW9 530 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 SCGB3A2Q96PL1 93 aa18.27■□□□□ 0.52
CTCF-202ENST00000401394 DIDO1Q9BTC0 2240 aaKnown RBP18.27■□□□□ 0.51
CTCF-202ENST00000401394 A0A1W2PR77 199 aa18.27■□□□□ 0.51
CTCF-202ENST00000401394 RPS10P46783 165 aaKnown RBP18.27■□□□□ 0.51
CTCF-202ENST00000401394 LYPD6BQ8NI32 183 aa18.27■□□□□ 0.51
CTCF-202ENST00000401394 FAM212BQ9NTI7 297 aaPredicted RBP18.27■□□□□ 0.51
CTCF-202ENST00000401394 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 HOXB1P14653 301 aaPredicted RBP18.26■□□□□ 0.51
CTCF-202ENST00000401394 GLP1RP43220 463 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 RPS23P62266 143 aaKnown RBP18.26■□□□□ 0.51
CTCF-202ENST00000401394 S100A12P80511 92 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 TLE1Q04724 770 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 P4HA3Q7Z4N8 544 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 WDSUB1Q8N9V3 476 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 NUDT16L1Q9BRJ7 211 aaKnown RBP18.26■□□□□ 0.51
CTCF-202ENST00000401394 TUBD1Q9UJT1 453 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 H0YL77 283 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 SMIM6P0DI80 62 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 RUNX1Q01196 453 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 TMEM217Q8N7C4 229 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 OIT3Q8WWZ8 545 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 PLEK2Q9NYT0 353 aa18.26■□□□□ 0.51
CTCF-202ENST00000401394 FAM3AP98173 230 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms