RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CCR9P51686 369 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 ZNF91Q05481 1191 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 BLMHQ13867 455 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 CNN3Q15417 329 aaKnown RBP12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 NCR3LG1Q68D85 454 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 DNAAF1Q8NEP3 725 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 RHOXF1Q8NHV9 184 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 TRMT10AQ8TBZ6 339 aaKnown RBP12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 LGALS12Q96DT0 336 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 Q96MT0 163 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 CHIAQ9BZP6 476 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 ELL3Q9HB65 397 aaPredicted RBP12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 FRRS1LQ9P0K9 344 aa12.2□□□□□ -0.46
SMIM11A-203ENST00000399299 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 LOC100130705A0A1B0GUX0 176 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 FAM230AA0A1W2PPH8 454 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 FAM181BA6NEQ2 426 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 H3BSH0 61 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 HTR1AP08908 422 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 FBP1P09467 338 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 DBTP11182 482 aaKnown RBP12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 UBE2E1P51965 193 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 CAPZA1P52907 286 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 OR12D2P58182 307 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 SHISA2Q6UWI4 295 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 UTS2BQ765I0 119 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 ANGPTL5Q86XS5 388 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 PDZD9Q8IXQ8 264 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 SYS1Q8N2H4 156 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 OR5D13Q8NGL4 314 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 SGMS2Q8NHU3 365 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 BORCS8Q96FH0 119 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 CEP19Q96LK0 163 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 RDH12Q96NR8 316 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 FAM234AQ9H0X4 552 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 MMP24Q9Y5R2 645 aa12.19□□□□□ -0.46
SMIM11A-203ENST00000399299 A0A1B0GUS0 222 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 A0A1W2PPH5 198 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 NPFFO15130 113 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 FADS2O95864 444 aaKnown RBP12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 IGHA1P01876 353 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 IER3P46695 156 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 RBP2P50120 134 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 NANOS3P60323 173 aaKnown RBP12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 ACSM1Q08AH1 577 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 RAB40BQ12829 278 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 KLRD1Q13241 179 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 GALEQ14376 348 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 ZSCAN26Q16670 478 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 FIP1L1Q6UN15 594 aaKnown RBP12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 RDH10Q8IZV5 341 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 FAM185AQ8N0U4 392 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 DYRK2Q92630 601 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 ADAT3Q96EY9 351 aaPredicted RBP12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 PELI1Q96FA3 418 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 C4orf36Q96KX1 117 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 DPAGT1Q9H3H5 408 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 INPP5EQ9NRR6 644 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 C19orf12Q9NSK7 152 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 MRPS18AQ9NVS2 196 aaKnown RBP12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 FAM118AQ9NWS6 357 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 MTCH1Q9NZJ7 389 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 ZNRD1Q9P1U0 126 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 AASSQ9UDR5 926 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 HHLA2Q9UM44 414 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 FAM96BQ9Y3D0 163 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 DSCAML1Q8TD84 2053 aa12.18□□□□□ -0.46
SMIM11A-203ENST00000399299 OR4C45A6NMZ5 311 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 H0YAE9 185 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 J3QLW9 94 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 NDUFA7O95182 113 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 IGHV4-59P01825 116 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 TK1P04183 234 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 CRYBA1P05813 215 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 RPSAP08865 295 aaKnown RBP12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 ZNF19P17023 458 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 PRKACBP22694 351 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 SAA4P35542 130 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 CEBPDP49716 269 aaPredicted RBP12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 ATP1B3P54709 279 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 RPL31P62899 125 aaKnown RBP12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 MRPL28Q13084 256 aaKnown RBP12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 ALKBH1Q13686 389 aaKnown RBP12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 Q8IYB0 196 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 OR4F5Q8NH21 305 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 SPSB1Q96BD6 273 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 ZNF649Q9BS31 505 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 ALG8Q9BVK2 526 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 SLITRK2Q9H156 845 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 SEBOXQ9HB31 216 aaPredicted RBP12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 OR14J1Q9UGF5 321 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 MYRFQ9Y2G1 1151 aa12.17□□□□□ -0.46
SMIM11A-203ENST00000399299 IGKV1-9A0A0C4DH69 117 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 K7N7A8 449 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 ZNF737O75373 536 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 CHRM2P08172 466 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 ZNF20P17024 532 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms