RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CHRM2P08172 466 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 CBR1P16152 277 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 DEFA6Q01524 100 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 ARFRP1Q13795 201 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 HAGHLQ6PII5 290 aaPredicted RBP10.24□□□□□ -0.77
COL25A1-202ENST00000399127 SSX9Q7RTT3 188 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 TMPRSS7Q7RTY8 843 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 EIF4E3Q8N5X7 224 aaKnown RBP10.24□□□□□ -0.77
COL25A1-202ENST00000399127 ELMOD3Q96FG2 381 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 FER1L6-AS2Q96M78 137 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 OR2A7Q96R45 310 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 CST11Q9H112 138 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 ASCL3Q9NQ33 180 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 OPN4Q9UHM6 478 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 LIPGQ9Y5X9 500 aa10.24□□□□□ -0.77
COL25A1-202ENST00000399127 SCGNO76038 276 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 HLA-AP01891 365 aaKnown RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 SP1P08047 785 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 CCL2P13500 99 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF708P17019 499 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 CCNOP22674 350 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 MTCP1P56278 107 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 SPCS3P61009 180 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 RAP2BP61225 183 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 SNRPEP62304 92 aaKnown RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 RPS27AP62979 156 aaKnown RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 ARF1P84077 181 aaKnown RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 DHRS2Q13268 280 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 MEF2DQ14814 521 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 RIPPLY2Q5TAB7 128 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 LIN54Q6MZP7 749 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 CPEB3Q8NE35 698 aaKnown RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 OR56B1Q8NGI3 324 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 OR4K15Q8NH41 348 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 HAS2Q92819 552 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 PRRT1Q99946 306 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 URM1Q9BTM9 101 aaKnown RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 DEFB127Q9H1M4 99 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 DLL3Q9NYJ7 618 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 NKX2-8O15522 239 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 IFNA6P05013 189 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 TMEM225BP0DP42 221 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 COX5BP10606 129 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 GABRR1P24046 479 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 CD82P27701 267 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 BLVRBP30043 206 aaPredicted RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 PPIAP62937 165 aaKnown RBP10.23□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF92Q03936 586 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 SSX2Q16385 188 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 CYB5R2Q6BCY4 276 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 DMBX1Q8NFW5 382 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 CCDC107Q8WV48 283 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 MICU1Q9BPX6 476 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 ST6GALNAC5Q9BVH7 336 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 GHRLQ9UBU3 117 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 PLEKHA6Q9Y2H5 1048 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 CSAG2Q9Y5P2 127 aa10.23□□□□□ -0.77
COL25A1-202ENST00000399127 IGKV1-27A0A075B6S5 117 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 F5H5P2 479 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 TM4SF5O14894 197 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 ARPC5O15511 151 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 SYNGR4O95473 234 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 HLA-HP01893 362 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 NDUFB7P17568 137 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 CXCL2P19875 107 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 GSK3AP49840 483 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 ADAD2Q8NCV1 583 aaKnown RBP10.22□□□□□ -0.77
COL25A1-202ENST00000399127 IP6K3Q96PC2 410 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 FN3KRPQ9HA64 309 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF581Q9P0T4 197 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF107Q9UII5 783 aaPredicted RBP10.22□□□□□ -0.77
COL25A1-202ENST00000399127 CBY1Q9Y3M2 126 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 FXYD6-FXYD2A0A087WZ82 144 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 MFNGO00587 321 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 CCSO14618 274 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 FARS2O95363 451 aaKnown RBP10.22□□□□□ -0.77
COL25A1-202ENST00000399127 GSTP1P09211 210 aaKnown RBP10.22□□□□□ -0.77
COL25A1-202ENST00000399127 UBBP0CG47 229 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 AKR1C4P17516 323 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 NKAPLQ5M9Q1 402 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 OR1S1Q8NH92 325 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 CA5BP1Q8WTZ4 195 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 DMRTA2Q96SC8 542 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 FXYD6Q9H0Q3 95 aa10.22□□□□□ -0.77
COL25A1-202ENST00000399127 ALX4Q9H161 411 aaPredicted RBP10.22□□□□□ -0.77
COL25A1-202ENST00000399127 MCTS1Q9ULC4 181 aaKnown RBP10.22□□□□□ -0.77
COL25A1-202ENST00000399127 NOP16Q9Y3C1 178 aaKnown RBP10.22□□□□□ -0.77
COL25A1-202ENST00000399127 PLSCR5A0PG75 271 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF503-AS2A6NEH8 195 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF587BE7ETH6 402 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 SLC31A2O15432 143 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 NME2P1O60361 137 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 CRYBA1P05813 215 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 MMP7P09237 267 aaPredicted RBP10.21□□□□□ -0.77
COL25A1-202ENST00000399127 MUC1P15941 1255 aaPredicted RBP10.21□□□□□ -0.77
COL25A1-202ENST00000399127 NME2P22392 152 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 VAMP1P23763 118 aa10.21□□□□□ -0.77
COL25A1-202ENST00000399127 PCBD1P61457 104 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms