RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MAB21L2Q9Y586 359 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 ATRXP46100 2492 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 NBEAQ8NFP9 2946 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 RAD51DO75771 328 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 ERCC1P07992 297 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-201ENST00000399126 IGHV1-2P23083 117 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 MNDAP41218 407 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 KIR2DL2P43627 348 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-201ENST00000399126 FAM3AP98173 230 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 MYPOPQ86VE0 399 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-201ENST00000399126 BCL2L2Q92843 193 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-201ENST00000399126 CLUHP3Q96NS8 147 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 C1QTNF5Q9BXJ0 243 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 OR51B6Q9H340 312 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 BANF2Q9H503 90 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 MED9Q9NWA0 146 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 MGAT4AQ9UM21 535 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 PCNX1Q96RV3 2341 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 ADGRG4Q8IZF6 3080 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 A0A0U1RQK1 487 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 hCG_38984A0A1B0GV85 526 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 SMAD7O15105 426 aaKnown RBP13.09□□□□□ -0.31
COL25A1-201ENST00000399126 EIF3GO75821 320 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL25A1-201ENST00000399126 NGFP01138 241 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 ALDOBP05062 364 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 S100A8P05109 93 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 GNG10P50151 68 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 C3P1Q6ZMU1 363 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 SEM1Q6ZVN7 128 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 GP6Q9HCN6 339 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 NIT2Q9NQR4 276 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF71Q9NQZ8 489 aaPredicted RBP13.09□□□□□ -0.31
COL25A1-201ENST00000399126 CRIM1Q9NZV1 1036 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 HLXQ14774 488 aaPredicted RBP13.09□□□□□ -0.31
COL25A1-201ENST00000399126 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 SFRP4Q6FHJ7 346 aaPredicted RBP13.09□□□□□ -0.31
COL25A1-201ENST00000399126 MDP1Q86V88 176 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 SFT2D1Q8WV19 159 aa13.09□□□□□ -0.31
COL25A1-201ENST00000399126 A0A0A6YYD4 124 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 TMEM235A6NFC5 223 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 A8MXK9 166 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 MKRN2OSH3BPM6 223 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 RAB27BO00194 218 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 SNTB2Q13425 540 aaKnown RBP13.08□□□□□ -0.31
COL25A1-201ENST00000399126 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 PP6455Q8WZ26 134 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 POFUT1Q9H488 388 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 HRASLSQ9HDD0 168 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 NUDT15Q9NV35 164 aa13.08□□□□□ -0.31
COL25A1-201ENST00000399126 SMG1Q96Q15 3661 aaKnown RBP13.08□□□□□ -0.32
COL25A1-201ENST00000399126 TMEM14DPA8MWL7 114 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 FABP7O15540 132 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 MPIG6BO95866 241 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 CELA3BP08861 270 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 FBP1P09467 338 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 VEGFCP49767 419 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 SLC22A6Q4U2R8 563 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 HACD4Q5VWC8 232 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 COLCA1Q6ZS62 124 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 SLC16A13Q7RTY0 426 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 POM121L2Q96KW2 1035 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 MARVELD1Q9BSK0 173 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 C1QTNF6Q9BXI9 259 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 GPR61Q9BZJ8 451 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 MIOXQ9UGB7 285 aa13.08□□□□□ -0.32
COL25A1-201ENST00000399126 IGKV1-27A0A075B6S5 117 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 ANKRD20A5PA0PJZ0 165 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 ZNF729A6NN14 1252 aaPredicted RBP13.07□□□□□ -0.32
COL25A1-201ENST00000399126 SPCS3P61009 180 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 GSG1Q2KHT4 349 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 EIF2S3LQ2VIR3 472 aaKnown RBP13.07□□□□□ -0.32
COL25A1-201ENST00000399126 EDARADDQ8WWZ3 215 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 RAB22AQ9UL26 194 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 FAM230AA0A1W2PPH8 454 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 H7C417 338 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 TOXO94900 526 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 COX5BP10606 129 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 GK2Q14410 553 aaPredicted RBP13.07□□□□□ -0.32
COL25A1-201ENST00000399126 PCGF3Q3KNV8 242 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 RTL6Q6ICC9 239 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 WNT2BQ93097 391 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 CACNG6Q9BXT2 260 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 MTFP1Q9UDX5 166 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 STARD10Q9Y365 291 aa13.07□□□□□ -0.32
COL25A1-201ENST00000399126 INMT-MINDY4F8WBC2 141 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 RAB6AP20340 208 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 PRSS3P35030 304 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 ARR3P36575 388 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 PTGFRP43088 359 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 TBR1Q16650 682 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 OLFML2AQ68BL7 652 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 TNFAIP8L1Q8WVP5 186 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 DVL3Q92997 716 aaPredicted RBP13.06□□□□□ -0.32
COL25A1-201ENST00000399126 PTX4Q96A99 478 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 SEH1LQ96EE3 360 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
COL25A1-201ENST00000399126 IL19Q9UHD0 177 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms