RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CELSR3Q9NYQ7 3312 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 SDK2Q58EX2 2172 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 H3BQ15 152 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 MASP2O00187 686 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 PPP1R2P9O14990 202 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 CLPSP04118 112 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 HPNP05981 417 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OR5AC1P0C628 307 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 RPS2P15880 293 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 TBPP20226 339 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 HOXA5P20719 270 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 HNRNPA2B1P22626 353 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 POLR2HP52434 150 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OR2T2Q6IF00 324 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 DNM1P34Q6PK57 102 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 FBXW12Q6X9E4 464 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 LYPD6Q86Y78 171 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OR5AS1Q8N127 324 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OR52M1Q8NGK5 317 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OR10S1Q8NGN2 331 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 STT3BQ8TCJ2 826 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 FGF14Q92915 247 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 EMG1Q92979 244 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 UNKLQ9H9P5 680 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 LTBP2Q14767 1821 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 A0A087X0M5 115 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 A0A1B0GX30 115 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 MS4A18H0YCH9 400 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 TNFP01375 233 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 ISG15P05161 165 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 SOD3P08294 240 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 FCGR2AP12318 317 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 THBS4P35443 961 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 CDX1P47902 265 aaPredicted RBP8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC6A8P48029 635 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 STARD6P59095 220 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 HSF1Q00613 529 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 TAF9Q16594 264 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 MS4A18Q3C1V0 323 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 VAX1Q5SQQ9 334 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF610Q8N9Z0 462 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OR8B12Q8NGG6 310 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OR2G3Q8NGZ4 309 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 Q8WTZ3 238 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 RNF133Q8WVZ7 376 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 TAAR9Q96RI9 348 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 SUSD2Q9UGT4 822 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 PADI1Q9ULC6 663 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 OSGIN2Q9Y236 505 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 HS3ST3B1Q9Y662 390 aa8.67□□□□□ -1.02
PTCHD4-202ENST00000398738 FAM24AA6NFZ4 105 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 CST7O76096 145 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 DANCRP0C864 163 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 FAHP16930 419 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 ERVFRD-1P60508 538 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 RHEBQ15382 184 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 HEPN1Q6WQI6 88 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM123Q8N131 208 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 OR11L1Q8NGX0 322 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 SSX3Q99909 188 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 FAAP24Q9BTP7 215 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 MCTS1Q9ULC4 181 aaKnown RBP8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 MT-ATP6P00846 226 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 AFF3P51826 1226 aaKnown RBP8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 DLK1P80370 383 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 FAM3AP98173 230 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 KHDC3LQ587J8 217 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 NTNG2Q96CW9 530 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 CHST5Q9GZS9 411 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 SRPK3Q9UPE1 567 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 HDGFL3Q9Y3E1 203 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 SLCO1B1Q9Y6L6 691 aa8.66□□□□□ -1.02
PTCHD4-202ENST00000398738 BTBD17A6NE02 478 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF724A8MTY0 619 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 F10P00742 488 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 OR5H8P0DN80 308 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 MPZP25189 248 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 KIR2DL1P43626 348 aaPredicted RBP8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 CLRN1P58418 232 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 RUNX1Q01196 453 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 KISS1Q15726 138 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 AKR1C8PQ5T2L2 129 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 CYB561D1Q8N8Q1 229 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 TOX2Q96NM4 488 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC46A1Q96NT5 459 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 IER2Q9BTL4 223 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC7A11Q9UPY5 501 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 KCNIP3Q9Y2W7 256 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 IGKV1-9A0A0C4DH69 117 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 A0A1W2PQF6 199 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 E9PLN8 166 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BKO60814 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BJP06899 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 TUBG1P23258 451 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BOP23527 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HIST1H2BBP33778 126 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 SFTPDP35247 375 aa8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 APOBEC1P41238 236 aaKnown RBP8.65□□□□□ -1.02
PTCHD4-202ENST00000398738 HSD17B7P56937 341 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms