RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 OR5AC2Q9NZP5 309 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 FANCMQ8IYD8 2048 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 XRCC2O43543 280 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 DIRAS3O95661 229 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TSPAN15O95858 294 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 F12P00748 615 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PSMB2P49721 201 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 DUSP3P51452 185 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 MFAP4P55083 255 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SHBQ15464 509 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RHBDD2Q6NTF9 364 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SULF2Q8IWU5 870 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TDHQ8IZJ6 230 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SLC25A45Q8N413 288 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PRR18Q8N4B5 295 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RASL12Q9NYN1 266 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 KCNMB2Q9Y691 235 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 G3V3Q6 166 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 CTRB1P17538 263 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 FCGR2CP31995 323 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ROM1Q03395 351 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 CNN3Q15417 329 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 MPPED2Q15777 294 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PCK2Q16822 640 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 HLA-BQ31612 363 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 CTRB2Q6GPI1 263 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM182Q6ZP80 229 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ERASQ7Z444 233 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RPS19BP1Q86WX3 136 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 OR6K3Q8NGY3 331 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RNF141Q8WVD5 230 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SMOC1Q9H4F8 434 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RPS10P5Q9NQ39 176 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 NSG1A0A0A6YYJ2 146 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 SEC14L6B5MCN3 397 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 CCL3P10147 92 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 EDN3P14138 238 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ID1P41134 155 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PPT1P50897 306 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM50BP56557 158 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RPS16P62249 146 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 GRB2P62993 217 aaKnown RBP4.35□□□□□ -1.71
SMAD4-202ENST00000398417 RIPPLY1Q0D2K3 151 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 LY6G6FQ5SQ64 297 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 PHYHD1Q5SRE7 291 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 KMT5CQ86Y97 462 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 ZDHHC22Q8N966 263 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 CADM4Q8NFZ8 388 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 WDR13Q9H1Z4 485 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 DNAJB11Q9UBS4 358 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 FREM2Q5SZK8 3169 aa4.35□□□□□ -1.71
SMAD4-202ENST00000398417 TO15178 435 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CNOT4O95628 575 aaKnown RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OPN1MWP04001 364 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CD74P04233 296 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OPN1MW2P0DN77 364 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OPN1MW3P0DN78 364 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 IGFBP3P17936 291 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CPT2P23786 658 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 FPR2P25090 351 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 UNC119Q13432 240 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 HES1Q14469 280 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ACTBL2Q562R1 376 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 THEM4Q5T1C6 240 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 GGNBP1Q5YKI7 109 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SLC25A47Q6Q0C1 308 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 HSD17B11Q8NBQ5 300 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SLC39A7Q92504 469 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 THSD7BQ9C0I4 1608 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 A0A0U1RQK1 487 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 A0A1W2PQM1 296 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 RNF222A6NCQ9 220 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 FAM24AA6NFZ4 105 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 HSD17B6O14756 317 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CD79AP11912 226 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 AFF3P51826 1226 aaKnown RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CLDN15P56746 228 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 LPCAT3Q6P1A2 487 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 GLRX5Q86SX6 157 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SLC25A42Q86VD7 318 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 DTWD2Q8NBA8 298 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SMRP1Q8NCR6 262 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SULT4A1Q9BR01 284 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 FAAP24Q9BTP7 215 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ALX4Q9H161 411 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 KCNIP2Q9NS61 270 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 GPR132Q9UNW8 380 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 TSC2P49815 1807 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 TRBV23-1A0A0A0MS06 115 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 NME2P1O60361 137 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 PTBP3O95758 552 aaKnown RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 HOXD4P09016 255 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OR8U9P0C7N5 309 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 EPHA8P29322 1005 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CARD18P57730 90 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 PRSS54Q6PEW0 395 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF610Q8N9Z0 462 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OR5L1Q8NGL2 311 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SPTSSAQ969W0 71 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms