RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PQLC2LA1A4F0 135 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 ANKRD30BLA7E2S9 258 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 RBMXL2O75526 392 aaKnown RBP5.09□□□□□ -1.59
PTPRD-206ENST00000397617 VDAC1P21796 283 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 ZP1P60852 638 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 SGCAQ16586 387 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 UQCC3Q6UW78 93 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 OR51A4Q8NGJ6 313 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 FGGYQ96C11 551 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 ZNF75AQ96N20 296 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 ATG5Q9H1Y0 275 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 CNTD2Q9H8S5 307 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 HSPB11Q9Y547 144 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 TMEM272A0A1B0GTI8 110 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 BTBD17A6NE02 478 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 CDC14BO60729 498 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 IGLV1-44P01699 117 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 IL15RAQ13261 267 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 ARFRP1Q13795 201 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 SLC7A10Q9NS82 523 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 IGKV1-9A0A0C4DH69 117 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 ZNF735P0CB33 412 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 MTCP1P56278 107 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 CAMK2BQ13554 666 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 PMS2P11Q13670 270 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 WBP1Q96G27 269 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 IFT46Q9NQC8 304 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 DLL4Q9NR61 685 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 EIF3KQ9UBQ5 218 aaKnown RBP5.09□□□□□ -1.59
PTPRD-206ENST00000397617 GAB2Q9UQC2 676 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 TEX13DA0A0J9YY54 714 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-206ENST00000397617 CD300LBA8K4G0 201 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 IFNA21P01568 189 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 HTR5AP47898 357 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 MFGE8Q08431 387 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-206ENST00000397617 LINC00303Q3SY05 128 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 TSPO2Q5TGU0 170 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 MEX3DQ86XN8 651 aaKnown RBP5.09□□□□□ -1.59
PTPRD-206ENST00000397617 C9orf62Q8N4C0 152 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 RFLNBQ8N5W9 214 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 OR5H2Q8NGV7 314 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 FNDC9Q8TBE3 224 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 SGK3Q96BR1 496 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 TLNRD1Q9H1K6 362 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 A0A1W2PPL8 197 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 H7C1C5 153 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 AMY2AP04746 511 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 TAGLN2P37802 199 aaKnown RBP5.09□□□□□ -1.59
PTPRD-206ENST00000397617 FCN2Q15485 313 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 SPAG16Q8N0X2 631 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 ZNF680Q8NEM1 530 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 SLC25A32Q9H2D1 315 aa5.09□□□□□ -1.59
PTPRD-206ENST00000397617 TEX51A0A1B0GUA7 166 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 DCDC2BA2VCK2 349 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 RNF212BA8MTL3 300 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 SSX4O60224 188 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 GLRXP35754 106 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 Q0VFX4 171 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 SHISA6Q6ZSJ9 500 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 SNX29P2Q8IUI4 249 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 OR51E1Q8TCB6 317 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 EDARADDQ8WWZ3 215 aa5.09□□□□□ -1.6
PTPRD-206ENST00000397617 FAM90A9PA6NNJ1 464 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 SELENOPP49908 381 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 FAM3AP98173 230 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 PSG4Q00888 419 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 SWI5Q1ZZU3 235 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 FAM180AQ6UWF9 173 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 KCNRGQ8N5I3 272 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 SLC30A7Q8NEW0 376 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 OR1K1Q8NGR3 316 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 NEK7Q8TDX7 302 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 KIRREL1Q96J84 757 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 EMC6Q9BV81 110 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 ANKRD34BA5PLL1 514 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 OR5H1A6NKK0 313 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 BOLA2-SMG1P6H3BVE0 249 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 S100A7P31151 101 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 UBA52P62987 128 aaKnown RBP5.08□□□□□ -1.6
PTPRD-206ENST00000397617 LGI3Q8N145 548 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 OSR2Q8N2R0 312 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 LRRC18Q8N456 261 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 AKIRIN1Q9H9L7 192 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-206ENST00000397617 DEPPQ9NTK1 212 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 SMCO3A2RU48 225 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 MCRIP1C9JLW8 97 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 ARPC1BO15143 372 aaKnown RBP5.08□□□□□ -1.6
PTPRD-206ENST00000397617 MAS1P04201 325 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 OR4E1P0C645 316 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 RAD52P43351 418 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 PAN3Q58A45 887 aaKnown RBP5.08□□□□□ -1.6
PTPRD-206ENST00000397617 PXDC1Q5TGL8 231 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 MRPL21Q7Z2W9 205 aaKnown RBP5.08□□□□□ -1.6
PTPRD-206ENST00000397617 MRGPRGQ86SM5 289 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 OR13C8Q8NGS7 320 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 MOB3AQ96BX8 217 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 AQP10Q96PS8 301 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 FAM234AQ9H0X4 552 aa5.08□□□□□ -1.6
PTPRD-206ENST00000397617 MBNL3Q9NUK0 354 aaKnown RBP5.08□□□□□ -1.6
PTPRD-206ENST00000397617 WASF3Q9UPY6 502 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms