RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ARID1AO14497 2285 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 NOTOA8MTQ0 251 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 C3orf80F5H4A9 247 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 SLC17A2O00624 439 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 SLC22A1O15245 554 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 LHBP01229 141 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 BCL3P20749 454 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 CD80P33681 288 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 RAB11BQ15907 218 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 FAM201AQ5SY85 155 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 GLIPR1L1Q6UWM5 242 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 DCSTAMPQ9H295 470 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 NDUFA13Q9P0J0 144 aa19.85■□□□□ 0.77
TSPAN4-203ENST00000397397 IFITM5A6NNB3 132 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 SRRM5B3KS81 715 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 H3BMQ9 156 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 WNT9BO14905 357 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 PPIHO43447 177 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 NOS1APO75052 506 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 ZNF205O95201 554 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 ACAA1P09110 424 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 CSF3P09919 207 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 GLRA1P23415 457 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 NPBWR2P48146 333 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 TMEM33P57088 247 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 SPCS2Q15005 226 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 P2RY14Q15391 338 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 RSU1Q15404 277 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 CLEC2AQ6UVW9 174 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 PEG10Q86TG7 708 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 C12orf43Q96C57 262 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 NRIP2Q9BQI9 281 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 METTL9Q9H1A3 318 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 RSL24D1Q9UHA3 163 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 NPTNQ9Y639 398 aa19.84■□□□□ 0.77
TSPAN4-203ENST00000397397 KDM4BO94953 1096 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 NXPH2O95156 264 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 FAM166AQ6J272 317 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 SFXN4Q6P4A7 337 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 ASCL4Q6XD76 172 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 C19orf18Q8NEA5 215 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 OR10K1Q8NGX5 313 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 FAM168AQ92567 244 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 TIMD4Q96H15 378 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 WDR13Q9H1Z4 485 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 STEAP1Q9UHE8 339 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 ITGB1BP2Q9UKP3 347 aa19.83■□□□□ 0.76
TSPAN4-203ENST00000397397 PPIAL4EA0A075B759 164 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 PPIAL4DF5H284 164 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 F8VVB4 439 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 F8VWA3 439 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 AIPO00170 330 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 PPIAL4FP0DN26 164 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 SLC2A2P11168 524 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 CLDN12P56749 244 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 ERVK11-1P61568 191 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 SFRP4Q6FHJ7 346 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 LURAP1LQ8IV03 231 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 Q8IYB0 196 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 TBC1D15Q8TC07 691 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 RAB1CQ92928 201 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 SLC25A28Q96A46 364 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 RBFOX1Q9NWB1 397 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 RASL12Q9NYN1 266 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 DAPK2Q9UIK4 370 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 PPIAL4AQ9Y536 164 aa19.82■□□□□ 0.76
TSPAN4-203ENST00000397397 HTR3BO95264 441 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 SFTPBP07988 381 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 RANBP1P43487 201 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 GPR6P46095 362 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 DSCR9P59020 149 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 CLEC12BQ2HXU8 276 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 SLC22A6Q4U2R8 563 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 AVPI1Q5T686 147 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 ACP7Q6ZNF0 438 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 EMG1Q92979 244 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 SEH1LQ96EE3 360 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 IL36GQ9NZH8 169 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 DNAJB11Q9UBS4 358 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 GHRLQ9UBU3 117 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 CREBBPQ92793 2442 aa19.81■□□□□ 0.76
TSPAN4-203ENST00000397397 IGHV3OR15-7A0A075B7D8 119 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 ZNF701M0R085 212 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 LGALS8O00214 317 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 CSTBP04080 98 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 UBBP0CG47 229 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 CALCBP10092 127 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 SERPINA2P20848 420 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 GIFP27352 417 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 CFPP27918 469 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 BTG1P62324 171 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 Q5PR19 223 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 IDNKQ5T6J7 187 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 CROCCP3Q8IVE0 287 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 FAM58AQ8N1B3 248 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 DEFB108BQ8NET1 73 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 C10orf105Q8TEF2 133 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 SLC25A46Q96AG3 418 aa19.8■□□□□ 0.76
TSPAN4-203ENST00000397397 PIMREGQ9BSJ6 248 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms