RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PLK3Q9H4B4 646 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
SEC13-209ENST00000397117 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 TAAR3PQ9P1P4 343 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 ING4Q9UNL4 249 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 LAMP3Q9UQV4 416 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 IGKV1-27A0A075B6S5 117 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 CD5LO43866 347 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 PLATP00750 562 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 IFNA2P01563 188 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 EIF4EP06730 217 aaKnown RBP11.24□□□□□ -0.61
SEC13-209ENST00000397117 DANCRP0C864 163 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 HAAOP46952 286 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 MMP15P51511 669 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 MZT1Q08AG7 82 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 NKPD1Q17RQ9 610 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 ZNF573Q86YE8 665 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 PALMDQ9NP74 551 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 CYSLTR2Q9NS75 346 aa11.24□□□□□ -0.61
SEC13-209ENST00000397117 MYEF2Q9P2K5 600 aaKnown RBP11.24□□□□□ -0.61
SEC13-209ENST00000397117 TMEM272A0A1B0GTI8 110 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 J3QRK9 145 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 CYB5AP00167 134 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 EVX1P49640 407 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 ZNF45Q02386 682 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 PDZK1IP1Q13113 114 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 RSU1Q15404 277 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 ADIPOQQ15848 244 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 SLC22A6Q4U2R8 563 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 DNM1P46Q6ZS02 220 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 OR10AD1Q8NGE0 317 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 RAB40AQ8WXH6 277 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 PHF21AQ96BD5 680 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
SEC13-209ENST00000397117 CST11Q9H112 138 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 METTL9Q9H1A3 318 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 KCNK15Q9H427 330 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 YAE1D1Q9NRH1 226 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 C14orf119Q9NWQ9 140 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 RHBDL2Q9NX52 303 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 EXTL2Q9UBQ6 330 aa11.23□□□□□ -0.61
SEC13-209ENST00000397117 PLCE1Q9P212 2302 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 TMEM210A6NLX4 147 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 E7EQL1 145 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 H0YL77 283 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 SPRY1O43609 319 aaPredicted RBP11.22□□□□□ -0.61
SEC13-209ENST00000397117 CRTAPO75718 401 aaPredicted RBP11.22□□□□□ -0.61
SEC13-209ENST00000397117 SOD3P08294 240 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 NAT2P11245 290 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 CD40LGP29965 261 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 SERPINF1P36955 418 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 ALDH3B1P43353 468 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 ZP1P60852 638 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 GPR176Q14439 515 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 CRIP3Q6Q6R5 217 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 FAM131AQ6UXB0 335 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 Q6ZR03 302 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 OR2W3Q7Z3T1 314 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 ZSCAN4Q8NAM6 433 aaPredicted RBP11.22□□□□□ -0.61
SEC13-209ENST00000397117 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 OR51F2Q8NH61 342 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 KCNG3Q8TAE7 436 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 FAM46BQ96A09 425 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 PTX4Q96A99 478 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 FGF23Q9GZV9 251 aaPredicted RBP11.22□□□□□ -0.61
SEC13-209ENST00000397117 ABCG5Q9H222 651 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 PCDHB16Q9NRJ7 776 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 CISD1Q9NZ45 108 aaKnown RBP11.22□□□□□ -0.61
SEC13-209ENST00000397117 RAB22AQ9UL26 194 aa11.22□□□□□ -0.61
SEC13-209ENST00000397117 LRP5LA4QPB2 252 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 MLNRO43193 412 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 ANGPTL7O43827 346 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 ZNF780AO75290 641 aaPredicted RBP11.21□□□□□ -0.61
SEC13-209ENST00000397117 KDM4BO94953 1096 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 CSTBP04080 98 aaKnown RBP11.21□□□□□ -0.61
SEC13-209ENST00000397117 VSIG8P0DPA2 414 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 RAB6AP20340 208 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 SERPINA2P20848 420 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 APOBEC3AP31941 199 aaPredicted RBP11.21□□□□□ -0.61
SEC13-209ENST00000397117 ZNF81P51508 661 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 PPP5CP53041 499 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 ZNF672Q499Z4 452 aaPredicted RBP11.21□□□□□ -0.61
SEC13-209ENST00000397117 OR10K2Q6IF99 312 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 HAGHLQ6PII5 290 aaPredicted RBP11.21□□□□□ -0.61
SEC13-209ENST00000397117 SLC25A26Q70HW3 274 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 C1QL2Q7Z5L3 287 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 CALHM1Q8IU99 346 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 MKXQ8IYA7 352 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 NEUROG1Q92886 237 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 SLC25A38Q96DW6 304 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 ATG5Q9H1Y0 275 aa11.21□□□□□ -0.61
SEC13-209ENST00000397117 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms