RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NSG2Q9Y328 171 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 MMACHCQ9Y4U1 282 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 A0A1W2PQD3 144 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 A6NIZ1 184 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 ARGFXA6NJG6 315 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 SOD3P08294 240 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 DRD1P21728 446 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 DDTP30046 118 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 GALNSP34059 522 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 TAGLN2P37802 199 aaKnown RBP21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 RAP1BP61224 184 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 PLXDC2Q6UX71 529 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 OIT3Q8WWZ8 545 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 CHST11Q9NPF2 352 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 CLEC1BQ9P126 229 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 BCAT2O15382 392 aaPredicted RBP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 MRPS21P82921 87 aaKnown RBP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 ELOBQ15370 118 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 SULF2Q8IWU5 870 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 HDHD3Q9BSH5 251 aaPredicted RBP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 URM1Q9BTM9 101 aaKnown RBP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 PRO1933Q9H354 126 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 SDHAF3Q9NRP4 125 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 SERINC1Q9NRX5 453 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 H3BQ15 152 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 APOBEC1P41238 236 aaKnown RBP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 CLRN1P58418 232 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 TAS2R60P59551 318 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 COL13A1Q5TAT6 717 aaPredicted RBP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 TMEM182Q6ZP80 229 aaPredicted RBP21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 RAB39BQ96DA2 213 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 IER2Q9BTL4 223 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 OR10A2Q9H208 303 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 NELFAQ9H3P2 528 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 MMP17Q9ULZ9 603 aa21.03■□□□□ 0.96
CSNK1E-203ENST00000396832 PPP1R2P9O14990 202 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 FASLGP48023 281 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 CEBPGP53567 150 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 TMED3Q9Y3Q3 217 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 IGKV1D-8A0A087WSZ0 117 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 A0A1W2PPC4 97 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 ZNF878C9JN71 531 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 XRCC2O43543 280 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 KHDC3LQ587J8 217 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 LRRC18Q8N456 261 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 LFNGQ8NES3 379 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 TGIF2Q9GZN2 237 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 BCO1Q9HAY6 547 aa21.02■□□□□ 0.96
CSNK1E-203ENST00000396832 A0A087X0M5 115 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 A0A1B0GX30 115 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 ZNF587BE7ETH6 402 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 DIRAS3O95661 229 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 SFTPDP35247 375 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 PKIAP61925 76 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 UBE2V2Q15819 145 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 HIST3H2BBQ8N257 126 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 APCDD1LQ8NCL9 501 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 OR2AJ1Q8NGZ0 328 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 HPSE2Q8WWQ2 592 aa21.02■□□□□ 0.95
CSNK1E-203ENST00000396832 ZNF726A6NNF4 738 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 ZNF814B7Z6K7 855 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 EFNA2O43921 213 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 GPR137BO60478 399 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 HEXBP07686 556 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 AFF3P51826 1226 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 DCAF7P61962 342 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 LSM6P62312 80 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 ZNF283Q8N7M2 679 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 ZNF2Q9BSG1 426 aaPredicted RBP21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 KLRF1Q9NZS2 232 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 A0A1B0GW64 132 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 ADAM10O14672 748 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 ZNF17P17021 662 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 BLVRBP30043 206 aaPredicted RBP21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 ERVFRD-1P60508 538 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 CCL20P78556 96 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 NHLH2Q02577 135 aa21.01■□□□□ 0.95
CSNK1E-203ENST00000396832 TGIF2-C20orf24A0A0A6YYL0 155 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 IGKV1-9A0A0C4DH69 117 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 UBE2KP61086 200 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 RNF4P78317 190 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 HIKESHIQ53FT3 197 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 TMEM234Q8WY98 164 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 RCL1Q9Y2P8 373 aaKnown RBP21■□□□□ 0.95
CSNK1E-203ENST00000396832 HS3ST3B1Q9Y662 390 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 TRGC2P03986 189 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 NKX6-1P78426 367 aaPredicted RBP21■□□□□ 0.95
CSNK1E-203ENST00000396832 MYBPHQ13203 477 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 FAM69BQ5VUD6 431 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 B3GAT1Q9P2W7 334 aa21■□□□□ 0.95
CSNK1E-203ENST00000396832 ADAMTS9Q9P2N4 1935 aa20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 RBFOX3A6NFN3 312 aa20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 GABRR1P24046 479 aa20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 SSX2Q16385 188 aa20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 SP6Q3SY56 376 aa20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 DTX1Q86Y01 620 aa20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 RNASE11Q8TAA1 199 aaKnown RBP20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 PIGTQ969N2 578 aa20.99■□□□□ 0.95
CSNK1E-203ENST00000396832 BTBD17A6NE02 478 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms