RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 hCG_38984A0A1B0GV85 526 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 GGT3PA6NGU5 568 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 DNAJC9-AS1A6NH13 148 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 F5H0A9 414 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-202ENST00000396828 TMPRSS2O15393 492 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 FOXH1O75593 365 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 HKR1P10072 659 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 SELEP16581 610 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 ZNF182P17025 639 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-202ENST00000396828 FSTP19883 344 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 RAB3BP20337 219 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 GATA3P23771 443 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 GSK3AP49840 483 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 RORCP51449 518 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 PSMD7P51665 324 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 FAM3AP98173 230 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 OR8B8Q15620 311 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 FAM27D1Q5T7N8 215 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 ZBTB37Q5TC79 503 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 Q6ZSR3 168 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 LRRC28Q86X40 367 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-202ENST00000396828 CROCCP3Q8IVE0 287 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 OR5AS1Q8N127 324 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 TEX29Q8N6K0 151 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 CSNK2A3Q8NEV1 391 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 SGMS2Q8NHU3 365 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 PP6455Q8WZ26 134 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 OR2V2Q96R30 315 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 PPIL3Q9H2H8 161 aaKnown RBP8.64□□□□□ -1.03
NEDD8-202ENST00000396828 NEK6Q9HC98 313 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 PTTG2Q9NZH5 202 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 INSIG2Q9Y5U4 225 aa8.64□□□□□ -1.03
NEDD8-202ENST00000396828 PPIAL4EA0A075B759 164 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 PPIAL4CA0A0B4J2A2 164 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 MEGF11A6BM72 1044 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 ANXA2P2A6NMY6 339 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 PPIAL4DF5H284 164 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 H0YL77 283 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 PIN1P1O15428 100 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 MAGEB3O15480 346 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 SULT1B1O43704 296 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 MAS1P04201 325 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 PPIAL4FP0DN26 164 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 IGHV4-38-2P0DP08 117 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 RAC2P15153 192 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 FAHP16930 419 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 RAB3AP20336 220 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 KITLGP21583 273 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 ANOS1P23352 680 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 FPR2P25090 351 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 CD80P33681 288 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 RPS19P39019 145 aaKnown RBP8.63□□□□□ -1.03
NEDD8-202ENST00000396828 DDOSTP39656 456 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 PRSS12P56730 875 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 BTG1P62324 171 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 HOXA4Q00056 320 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-202ENST00000396828 PAX2Q02962 417 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 FBXW12Q6X9E4 464 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 NKAIN3Q8N8D7 197 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 OR1M1Q8NGA1 313 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 OR10AD1Q8NGE0 317 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 DYNC2LI1Q8TCX1 351 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 AP3S1Q92572 193 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 SLC25A46Q96AG3 418 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 ORAI1Q96D31 301 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 ADAT3Q96EY9 351 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-202ENST00000396828 DIRC2Q96SL1 478 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 ZNF747Q9BV97 191 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 ZCCHC4Q9H5U6 513 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 GCM1Q9NP62 436 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 TAS2R4Q9NYW5 299 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 CCDC59Q9P031 241 aaKnown RBP8.63□□□□□ -1.03
NEDD8-202ENST00000396828 CGGBP1Q9UFW8 167 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-202ENST00000396828 NUP50Q9UKX7 468 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 POLR3KQ9Y2Y1 108 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-202ENST00000396828 AUP1Q9Y679 476 aa8.63□□□□□ -1.03
NEDD8-202ENST00000396828 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 ZNF816-ZNF321PA0A0X1KG74 233 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 MDFIC2A0A1B0GVS7 189 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 ANKRD61A6NGH8 418 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 A6NIN4 97 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 ANKRD30BLA7E2S9 258 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 CEACAM18A8MTB9 384 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM178BH3BS89 294 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM127O75204 238 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 CYB5R3P00387 301 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-202ENST00000396828 WNT2P09544 360 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 IGFBP3P17936 291 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-202ENST00000396828 PRTN3P24158 256 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 BDKRB2P30411 391 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 PMELP40967 661 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 RANBP1P43487 201 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 PAX8Q06710 450 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 CNN3Q15417 329 aaKnown RBP8.62□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM155Q4W5P6 130 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 CEP78Q5JTW2 689 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 PRR31Q5SQ13 230 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 FAM201AQ5SY85 155 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 CLVS2Q5SYC1 327 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 GLT8D1Q68CQ7 371 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms