RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CCDC54Q8NEL0 328 aa13.68□□□□□ -0.22
HOXA3-202ENST00000396352 CCDC74BQ96LY2 380 aa13.68□□□□□ -0.22
HOXA3-202ENST00000396352 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
HOXA3-202ENST00000396352 HSF4Q9ULV5 492 aa13.68□□□□□ -0.22
HOXA3-202ENST00000396352 TIMM10BQ9Y5J6 103 aa13.68□□□□□ -0.22
HOXA3-202ENST00000396352 FOLR2P14207 255 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 PNLIPP16233 465 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 SUCLG1P53597 346 aaKnown RBP13.67□□□□□ -0.22
HOXA3-202ENST00000396352 SP6Q3SY56 376 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 SECTM1Q8WVN6 248 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 SPTSSAQ969W0 71 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 MARS2Q96GW9 593 aaKnown RBP13.67□□□□□ -0.22
HOXA3-202ENST00000396352 GNRHR2Q96P88 292 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 SCRT1Q9BWW7 348 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 PARP12Q9H0J9 701 aaKnown RBP13.67□□□□□ -0.22
HOXA3-202ENST00000396352 PLEKHA2Q9HB19 425 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 STARD10Q9Y365 291 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 OPRM1P35372 400 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 SPSB1Q96BD6 273 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 METTL9Q9H1A3 318 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 NECAP2Q9NVZ3 263 aa13.67□□□□□ -0.22
HOXA3-202ENST00000396352 MASP2O00187 686 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 ZIC3O60481 467 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 EIF1BO60739 113 aaKnown RBP13.66□□□□□ -0.22
HOXA3-202ENST00000396352 OR5AC1P0C628 307 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 HABP2Q14520 560 aaPredicted RBP13.66□□□□□ -0.22
HOXA3-202ENST00000396352 PPP1R3BQ86XI6 285 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 DYRK2Q92630 601 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 TOMM40LQ969M1 308 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 GALNT14Q96FL9 552 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 EGLN1Q9GZT9 426 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 NAA60Q9H7X0 242 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 TERTO14746 1132 aaKnown RBP13.66□□□□□ -0.22
HOXA3-202ENST00000396352 VAMP5O95183 116 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 APOC1P02654 83 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 CCL3P10147 92 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 LIFP15018 202 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 DTYMKP23919 212 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 CHATP28329 748 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 CHAF1BQ13112 559 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 FAM27BQ5VT28 67 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 ULBP2Q9BZM5 246 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 SMCO4Q9NRQ5 59 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 GDF9O60383 454 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 UCP2P55851 309 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 PRSS12P56730 875 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 RSU1Q15404 277 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 RAET1LQ5VY80 246 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 MAML2Q8IZL2 1156 aaPredicted RBP13.66□□□□□ -0.22
HOXA3-202ENST00000396352 SFT2D1Q8WV19 159 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 CLCC1Q96S66 551 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 ZDHHC8Q9ULC8 765 aa13.66□□□□□ -0.22
HOXA3-202ENST00000396352 FAM230AA0A1W2PPH8 454 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 ZNF850A8MQ14 1090 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 E5RGE8 158 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 ZNF728P0DKX0 622 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 SNCAP37840 140 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 MRPS34P82930 218 aaKnown RBP13.65□□□□□ -0.22
HOXA3-202ENST00000396352 SWI5Q1ZZU3 235 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 TSPO2Q5TGU0 170 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 C20orf196Q8IYI0 205 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 RTN4IP1Q8WWV3 396 aaPredicted RBP13.65□□□□□ -0.22
HOXA3-202ENST00000396352 NTNG2Q96CW9 530 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 ANGPTL4Q9BY76 406 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 NSG2Q9Y328 171 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 KPTNQ9Y664 436 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 LOC102723996A0A087X1L8 192 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 SYNGR3O43761 229 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 DANCRP0C864 163 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 PPT1P50897 306 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 MIDNQ504T8 468 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 ASCL4Q6XD76 172 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 LYZL2Q7Z4W2 148 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 TMEM156Q8N614 296 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 C15orf54Q8N8G6 183 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 LRTM2Q8N967 370 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 REEP6Q96HR9 211 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 C18orf12Q96KH6 178 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 FAM212BQ9NTI7 297 aaPredicted RBP13.65□□□□□ -0.22
HOXA3-202ENST00000396352 OCIAD1Q9NX40 245 aa13.65□□□□□ -0.22
HOXA3-202ENST00000396352 NXT1Q9UKK6 140 aaKnown RBP13.65□□□□□ -0.22
HOXA3-202ENST00000396352 AKR1C3P42330 323 aa13.65□□□□□ -0.23
HOXA3-202ENST00000396352 DSCR4P56555 118 aaPredicted RBP13.65□□□□□ -0.23
HOXA3-202ENST00000396352 HPSE2Q8WWQ2 592 aa13.65□□□□□ -0.23
HOXA3-202ENST00000396352 SRXN1Q9BYN0 137 aa13.65□□□□□ -0.23
HOXA3-202ENST00000396352 MRPS17Q9Y2R5 130 aaKnown RBP13.65□□□□□ -0.23
HOXA3-202ENST00000396352 IGHV1-45A0A0A0MS14 117 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 IGKV1-12A0A0C4DH73 117 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 G3V3Y1 287 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 H7C1Q1 480 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 DIRAS3O95661 229 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 IGKV1D-12P01611 117 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 IFNA4P05014 189 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 MEOX2P50222 304 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 RAB35Q15286 201 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 BRICD5Q6PL45 260 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 OR10AD1Q8NGE0 317 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms