RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TNK1Q13470 666 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TAF9Q16594 264 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 HYAL4Q2M3T9 481 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PABPC1L2AQ5JQF8 200 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SLC25A47Q6Q0C1 308 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MFSD4AQ8N468 514 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR51S1Q8NGJ8 323 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SMDT1Q9H4I9 107 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 B3GNT2Q9NY97 397 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SLCO1B1Q9Y6L6 691 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ADH4P08319 380 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 DUSP1P28562 367 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 LUMP51884 338 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ATP5IP56385 69 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 FMODQ06828 376 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 FAM27D1Q5T7N8 215 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ANKRD34AQ69YU3 496 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM91Q6ZNR0 172 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ABHD14BQ96IU4 210 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RAB19A4D1S5 217 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 UPK3AO75631 287 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MBP02144 154 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF708P17019 499 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 GLRXP35754 106 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 DHODHQ02127 395 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 IL13RA2Q14627 380 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 GLDNQ6ZMI3 551 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CA5BP1Q8WTZ4 195 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 DNAJA3Q96EY1 480 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 KLK11Q9UBX7 282 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 FBXL2Q9UKC9 423 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 NKX6-3A6NJ46 265 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PRF1P14222 555 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 EPHA1P21709 976 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 FPR2P25090 351 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 KLF3P57682 345 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SNRPD2P62316 118 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 DEFB109BQ30KR1 87 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 GFRALQ6UXV0 394 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR8B12Q8NGG6 310 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RND1Q92730 232 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ANXA10Q9UJ72 324 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CD300LBA8K4G0 201 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TIAF1O95411 115 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR8U9P0C7N5 309 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 HRH1P35367 487 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SELENOPP49908 381 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 OR10A3P58181 314 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 PLA2G2CQ5R387 149 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SF3B6Q9Y3B4 125 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SLC2A1P11166 492 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 S100A10P60903 97 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 TLE4Q04727 773 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 RNASE12Q5GAN4 147 aaKnown RBP2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ALKBH2Q6NS38 261 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 SLC22A25Q6T423 547 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 FAM219AQ8IW50 185 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 CMTM4Q8IZR5 234 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 VSTM2AQ8TAG5 236 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 IL1F10Q8WWZ1 152 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 MMP28Q9H239 520 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 HRASLSQ9HDD0 168 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 ZDHHC8Q9ULC8 765 aa2.98□□□□□ -1.93
VPS13C-203ENST00000395896 IGKV1D-42A0A075B6H8 117 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 TRGV10A0A0A0MS01 117 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM30CPA0ZSE6 113 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RPL36A-HNRNPH2H7BZ11 118 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 I3L521 148 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 CAV3P56539 151 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR52W1Q6IF63 320 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 NCCRP1Q6ZVX7 275 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 HSD17B8Q92506 261 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 PKIBQ9C010 78 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR5V1Q9UGF6 321 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 LOC100509620A0A075B734 347 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 HRASP01112 189 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 FABP1P07148 127 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR4E1P0C645 316 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 TMIGD3P0DMS9 266 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF345Q14585 488 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 HAGHLQ6PII5 290 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SVBPQ8N300 66 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR5D18Q8NGL1 313 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR13C8Q8NGS7 320 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ABHD3Q8WU67 409 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 PTDSS2Q9BVG9 487 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZMAT3Q9HA38 289 aaKnown RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 A0A0B4J2A0 478 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 J3QRE1 110 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 GPR31O00270 319 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 GLRA1P23415 457 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 COMPP49747 757 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 TAS2R30P59541 319 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 H3F3CQ6NXT2 135 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SFTPA2Q8IWL1 248 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR4S1Q8NGB4 309 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR2AE1Q8NHA4 323 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 TRIB1Q96RU8 372 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 MYOZ1Q9NP98 299 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms