RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GK2Q14410 553 aaPredicted RBP13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 TERB2Q8NHR7 220 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 OR2J1Q9GZK6 312 aa13.82□□□□□ -0.2
SMARCD1-202ENST00000394963 CD1AP06126 327 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF883P0CG24 379 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 GABRA2P47869 451 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 H2BFSP57053 126 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF260Q3ZCT1 412 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 JMJD6Q6NYC1 403 aaPredicted RBP13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 FDX2Q6P4F2 183 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 FBXW12Q6X9E4 464 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 GON7Q9BXV9 100 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 MBD2Q9UBB5 411 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 DNAJB11Q9UBS4 358 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 B8ZZF3 427 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 CTDSPLO15194 276 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 HPNP05981 417 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 TMEM50BP56557 158 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 COMMD7Q86VX2 200 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 TMEM200AQ86VY9 491 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 CALHM1Q8IU99 346 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 CHST5Q9GZS9 411 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 TINAGQ9UJW2 476 aa13.81□□□□□ -0.2
SMARCD1-202ENST00000394963 MEIKINA0A087WXM9 373 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 TRAV17A0A0B4J275 112 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 PHF1O43189 567 aaPredicted RBP13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 EIF2S3P41091 472 aaKnown RBP13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 DEFA5Q01523 94 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 ZDHHC23Q8IYP9 409 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 TMEM229BQ8NBD8 167 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 HAS2Q92819 552 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 SCPEP1Q9HB40 452 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 IGLV3-32A0A0A0MS00 114 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 MCRIP1C9JLW8 97 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 XRCC2O43543 280 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 CFDP00746 253 aaPredicted RBP13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 WT1P19544 449 aaPredicted RBP13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 GCH1P30793 250 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 CBX5P45973 191 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 LHX2P50458 406 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 IAH1Q2TAA2 248 aaPredicted RBP13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 VRK1Q99986 396 aaPredicted RBP13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 PECRQ9BY49 303 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 TRAPPC2LQ9UL33 140 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 MED19A0JLT2 244 aaPredicted RBP13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 CDIPTO14735 213 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 CAV2P51636 162 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 B3GALT5-AS1P59052 145 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 TBC1D28Q2M2D7 210 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF626Q68DY1 528 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 FAM210AQ96ND0 272 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 BCO1Q9HAY6 547 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 PFDN2Q9UHV9 154 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 AK3Q9UIJ7 227 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 RNF150Q9ULK6 438 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF175Q9Y473 711 aa13.8□□□□□ -0.2
SMARCD1-202ENST00000394963 CD300LBA8K4G0 201 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 PRH1P02810 166 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 BCL3P20749 454 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 DTX1Q86Y01 620 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 C9orf62Q8N4C0 152 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 CISD2Q8N5K1 135 aaKnown RBP13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 RFESDQ8TAC1 157 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 SLC25A28Q96A46 364 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 SYNGR1O43759 233 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 SCGNO76038 276 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 CST2P09228 141 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 SULT1A3P0DMM9 295 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 SULT1A4P0DMN0 295 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 GABRA1P14867 456 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 TPRX1Q8N7U7 411 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 LRRC20Q8TCA0 184 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 NABP1Q96AH0 204 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 C7orf66A4D0T2 115 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 M0R1B8 84 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 TFF1P04155 84 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 IGFBP3P17936 291 aaPredicted RBP13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 CLDN18P56856 261 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 CSRP2Q16527 193 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 VWA1Q6PCB0 445 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 BEND4Q6ZU67 534 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 SCGB3A2Q96PL1 93 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 OPN3Q9H1Y3 402 aaPredicted RBP13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 PNRC2Q9NPJ4 139 aaKnown RBP13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 RABL2AQ9UBK7 228 aaPredicted RBP13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 RABL2BQ9UNT1 228 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 SESN1Q9Y6P5 492 aa13.79□□□□□ -0.2
SMARCD1-202ENST00000394963 CYTIPO60759 359 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 SLC34A2O95436 690 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 RLN2P04090 185 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF728P0DKX0 622 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 FSTP19883 344 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 S100A11P31949 105 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 PIGPP57054 158 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 OR13C8Q8NGS7 320 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 TMEM54Q969K7 222 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 SULT4A1Q9BR01 284 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 ZNF286AQ9HBT8 521 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 A0A0A6YYD4 124 aa13.78□□□□□ -0.2
SMARCD1-202ENST00000394963 LGALS8O00214 317 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms