RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ANXA10Q9UJ72 324 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 ZNF407Q9C0G0 2248 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 GJE1A6NN92 205 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 RFC3P40938 356 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 RAB32Q13637 225 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 SURF2Q15527 256 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-202ENST00000394888 PAN3Q58A45 887 aaKnown RBP13.29□□□□□ -0.28
CPSF7-202ENST00000394888 TMEM200AQ86VY9 491 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 CSNK2A3Q8NEV1 391 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 OR1S2Q8NGQ3 325 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 ACKR4Q9NPB9 350 aa13.29□□□□□ -0.28
CPSF7-202ENST00000394888 P04436 131 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 IFNA6P05013 189 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 SNTB1Q13884 538 aaKnown RBP13.28□□□□□ -0.28
CPSF7-202ENST00000394888 C10orf91Q5T1B1 145 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 PRSS54Q6PEW0 395 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 BPIFCQ8NFQ6 507 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 OR2M7Q8NG81 312 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 ARPC5LQ9BPX5 153 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 TUBD1Q9UJT1 453 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 FAM25EA8MYX2 175 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 BET1O15155 118 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 NPBWR2P48146 333 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 MTCP1P56278 107 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 TAS2R46P59540 309 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 ZNF273Q14593 569 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 TAF9Q16594 264 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 AAED1Q7RTV5 226 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 HPSE2Q8WWQ2 592 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 PPA2Q9H2U2 334 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 SLC7A10Q9NS82 523 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 PPA1Q15181 289 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 LDLRAD3Q86YD5 345 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
CPSF7-202ENST00000394888 C13orf42A0A1B0GVH6 325 aa13.27□□□□□ -0.28
CPSF7-202ENST00000394888 RPL36A-HNRNPH2H7BZ11 118 aa13.27□□□□□ -0.28
CPSF7-202ENST00000394888 MED12LQ86YW9 2145 aa13.27□□□□□ -0.28
CPSF7-202ENST00000394888 CSTBP04080 98 aaKnown RBP13.27□□□□□ -0.29
CPSF7-202ENST00000394888 HKR1P10072 659 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 NAAAQ02083 359 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 PDZK1IP1Q13113 114 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 BSCL2Q96G97 398 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-202ENST00000394888 C11orf1Q9H5F2 150 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 LDAHQ9H6V9 325 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 FAM230AA0A1W2PPH8 454 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 MTRF1O75570 445 aaKnown RBP13.27□□□□□ -0.29
CPSF7-202ENST00000394888 IGHV3-9P01782 118 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 ARFRP1Q13795 201 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 LHFPL5Q8TAF8 219 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 ZNF2Q9BSG1 426 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-202ENST00000394888 PRDM14Q9GZV8 571 aa13.27□□□□□ -0.29
CPSF7-202ENST00000394888 RYDENQ9NUL5 291 aaKnown RBP13.27□□□□□ -0.29
CPSF7-202ENST00000394888 HTR5AP47898 357 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 NRN1LQ496H8 165 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 PABPC1L2AQ5JQF8 200 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 OR2A2Q6IF42 318 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 DEFB123Q8N688 67 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 AMDHD2Q9Y303 409 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 KANTRA0A1W2PQU2 76 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 PQLC2LA1A4F0 135 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 FAM157AC9JC47 383 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 C3orf80F5H4A9 247 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 MPLP40238 635 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 CYB561P49447 251 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 BTN1A1Q13410 526 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 PDCD1Q15116 288 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 RAB11FIP2Q7L804 512 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 DCUN1D4Q92564 292 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 TAAR9Q96RI9 348 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 ZNF471Q9BX82 626 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-202ENST00000394888 LINC00470Q9BZP3 86 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 ARRDC1-AS1Q9H2J1 176 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 TIMM10BQ9Y5J6 103 aa13.26□□□□□ -0.29
CPSF7-202ENST00000394888 CTSDP07339 412 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-202ENST00000394888 NOVA1P51513 510 aaKnown RBP13.26□□□□□ -0.29
CPSF7-202ENST00000394888 CPNE4Q96A23 557 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-202ENST00000394888 LILRA1O75019 489 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 NRASP01111 189 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 ICAM2P13598 275 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 DTYMKP23919 212 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 GDF1P27539 372 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 KCNJ3P48549 501 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 TMEM187Q14656 261 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 TMEM268Q5VZI3 342 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 MRPL24Q96A35 216 aaKnown RBP13.25□□□□□ -0.29
CPSF7-202ENST00000394888 THOC3Q96J01 351 aaKnown RBP13.25□□□□□ -0.29
CPSF7-202ENST00000394888 C2orf50Q96LR7 162 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 CDC6Q99741 560 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 IL36RNQ9UBH0 155 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 ZNF629Q9UEG4 869 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-202ENST00000394888 C5orf51A6NDU8 294 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 LMO1P25800 156 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 OPRM1P35372 400 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 C18orf12Q96KH6 178 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
CPSF7-202ENST00000394888 PFDN2Q9UHV9 154 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 PLATP00750 562 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms