RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CEACAM16Q2WEN9 425 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 SHISA5Q8N114 240 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 NECAP1Q8NC96 275 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 OR13F1Q8NGS4 319 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 FGF14Q92915 247 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 TMEM191AQ9H0A3 160 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 CLDN18P56856 261 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 OR2T2Q6IF00 324 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 MYPOPQ86VE0 399 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-205ENST00000394768 C20orf196Q8IYI0 205 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 EXTL1Q92935 676 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 SNRNP40Q96DI7 357 aaKnown RBP6.67□□□□□ -1.34
SYNE2-205ENST00000394768 GPR137Q96N19 417 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 TMEM204Q9BSN7 226 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 GABARAPL3Q9BY60 117 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 NAA60Q9H7X0 242 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 LTB4R2Q9NPC1 389 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 EP300Q09472 2414 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-205ENST00000394768 TNFSF10P50591 281 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 PAQR6Q6TCH4 344 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 KLHDC9Q8NEP7 349 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 PRNDQ9UKY0 176 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 SCN2AQ99250 2005 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 A0A1B0GTQ1 180 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 ALG1L2C9J202 215 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 CORTO00230 105 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 BCL2L11O43521 198 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 AGFG2O95081 481 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 CD80P33681 288 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 MEOX2P50222 304 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 GAMTQ14353 236 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 TMEM229BQ8NBD8 167 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 ALKBH3Q96Q83 286 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-205ENST00000394768 TMUB1Q9BVT8 246 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 NIT2Q9NQR4 276 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 PIPOXQ9P0Z9 390 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 CTDSP2O14595 271 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 MBPP02686 304 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-205ENST00000394768 OR4E1P0C645 316 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 BHLHA15Q7RTS1 189 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-205ENST00000394768 C1orf210Q8IVY1 113 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 ZNF383Q8NA42 475 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 OR1B1Q8NGR6 318 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 FAM210BQ96KR6 192 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 MMP24Q9Y5R2 645 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 KIF13BQ9NQT8 1826 aa6.67□□□□□ -1.34
SYNE2-205ENST00000394768 GYPAP02724 150 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 HYAL1Q12794 435 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ZNF547Q8IVP9 402 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ELOA3CA0A087WX78 387 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 DUXBA0A1W2PPF3 345 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 FAM181BA6NEQ2 426 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 TMEM210A6NLX4 147 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ALDOCP09972 364 aaKnown RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 VDAC1P21796 283 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 SRD5A2P31213 254 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 METAP1P53582 386 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ZNF750Q32MQ0 723 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 CST9Q5W186 159 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 SARGQ9BW04 601 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 A0A0B4J293 547 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 CA11O75493 328 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 MT-CO3P00414 261 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 P01737 135 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 CMBLQ96DG6 245 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 C11orf54Q9H0W9 315 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 FGF22Q9HCT0 170 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 A0A087WUJ7 227 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 OR2A25A4D2G3 310 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 PRSS1P07477 247 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 CBR1P16152 277 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 PAPPA-AS1Q5QFB9 102 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 DHRS13Q6UX07 377 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ZBTB34Q8NCN2 500 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ZNF552Q9H707 407 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ACER3Q9NUN7 267 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 BET1LQ9NYM9 111 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 WASHC3Q9Y3C0 194 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 PLCH1Q4KWH8 1693 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 FCN1O00602 326 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 PDE6DO43924 150 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 PGA4P0DJD7 388 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 PGA5P0DJD9 388 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 MMP11P24347 488 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 SLC38A11Q08AI6 406 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ADIPOQQ15848 244 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 UNQ9370/PRO34162Q6UXP9 181 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 OR8I2Q8N0Y5 310 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 EID2BQ96D98 161 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ZFC3H1O60293 1989 aaKnown RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 DNPH1O43598 174 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 PRF1P14222 555 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 COL19A1Q14993 1142 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 RASL12Q9NYN1 266 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 MTCH2Q9Y6C9 303 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ABCA1O95477 2261 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 MMP15P51511 669 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 TAS2R60P59551 318 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 TCTN1Q2MV58 587 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 TBC1D26Q86UD7 250 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms