RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CRLF2Q9HC73 371 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 TMEM100Q9NV29 134 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 P4HTMQ9NXG6 502 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 AK3Q9UIJ7 227 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 FOXD3Q9UJU5 478 aaPredicted RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 PCDHGA1Q9Y5H4 931 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 A0A087WZY1 265 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 F8W036 122 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 SCGB1D2O95969 90 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 CSTBP04080 98 aaKnown RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 CTSSP25774 331 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 FXYD4P59646 89 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 BLOC1S1P78537 153 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 RPUSD3Q6P087 351 aaKnown RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 CLRN3Q8NCR9 226 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 EMG1Q92979 244 aaKnown RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 REEP6Q96HR9 211 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 C2orf50Q96LR7 162 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 S100A13Q99584 98 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 LSM5Q9Y4Y9 91 aaKnown RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 HKR1P10072 659 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 MUC1P15941 1255 aaPredicted RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 OTX1P32242 354 aaPredicted RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 SUCLG1P53597 346 aaKnown RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 PLA2G2CQ5R387 149 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 Q96M66 194 aa11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 SAV1Q9H4B6 383 aaPredicted RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 PRRC2CQ9Y520 2896 aaKnown RBP11.72□□□□□ -0.53
GTF2F1-201ENST00000394456 A0A0U1RQV5 110 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 LOC102725191A0A1B0GVB3 256 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 GEMIN2O14893 280 aaKnown RBP11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 FARS2O95363 451 aaKnown RBP11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 IGHEP01854 428 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 P04436 131 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 ACTBL2Q562R1 376 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 PABPC1L2AQ5JQF8 200 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 ACER2Q5QJU3 275 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 ERGIC1Q969X5 290 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 GPHA2Q96T91 129 aa11.71□□□□□ -0.53
GTF2F1-201ENST00000394456 FAM186AA6NE01 2351 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 A0A1B0GW55 424 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 CXCL13O43927 109 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 CBR3O75828 277 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 LCATP04180 440 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DUX4L2P0CJ85 424 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DUX4L3P0CJ86 424 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DUX4L4P0CJ87 422 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DUX4L5P0CJ88 424 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DUX4L6P0CJ89 424 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DUX4L7P0CJ90 424 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 RFC3P40938 356 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 HIST1H3AP68431 136 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 SSPNQ14714 243 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 PHLDA2Q53GA4 152 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 HIST2H3PS2Q5TEC6 136 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 H3F3CQ6NXT2 135 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DHRS13Q6UX07 377 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 HIST2H3AQ71DI3 136 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 SLC16A14Q7RTX9 510 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 OR11L1Q8NGX0 322 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 TM2D1Q9BX74 207 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DUX4Q9UBX2 424 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF629Q9UEG4 869 aaPredicted RBP11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 DNAJC13O75165 2243 aa11.71□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF587BE7ETH6 402 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 XRCC2O43543 280 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 SGCEO43556 437 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 DIRAS3O95661 229 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF32P17041 273 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 CRYGSP22914 178 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 CPT2P23786 658 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 TAS2R46P59540 309 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 AKIRIN2Q53H80 203 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 C9orf135Q5VTT2 229 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 GGNBP1Q5YKI7 109 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 OR14L1PQ8NHC6 308 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 RNF141Q8WVD5 230 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 AQP10Q96PS8 301 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 DEPPQ9NTK1 212 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF407Q9C0G0 2248 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 IFNA2P01563 188 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 OR5H8P0DN80 308 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 LYL1P12980 280 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 AKR1C3P42330 323 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 ASCL1P50553 236 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 CLDN15P56746 228 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 B3GALT5-AS1P59052 145 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 SCRN3Q0VDG4 424 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 WIPI1Q5MNZ9 446 aaPredicted RBP11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 SULF2Q8IWU5 870 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF845Q96IR2 970 aaPredicted RBP11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 SGCZQ96LD1 299 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 PCDHB16Q9NRJ7 776 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 LPAR3Q9UBY5 353 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 PURGQ9UJV8 347 aaKnown RBP11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 RFNGQ9Y644 331 aa11.7□□□□□ -0.54
GTF2F1-201ENST00000394456 DMXL1Q9Y485 3027 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 RAB19A4D1S5 217 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms