RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ST3GAL6Q9Y274 331 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 TRAV14DV4A0A0A6YYC5 116 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 OR5H14A6NHG9 310 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 SERPINE3A8MV23 424 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 L7N2F9 121 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 RGS11O94810 467 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 CELA3BP08861 270 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 GLRA1P23415 457 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 IL32P24001 234 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 GPM6AP51674 278 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 AP2S1P53680 142 aaPredicted RBP12.99□□□□□ -0.33
GPC3-202ENST00000394299 PRDX4Q13162 271 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 EXOSC2Q13868 293 aaKnown RBP12.99□□□□□ -0.33
GPC3-202ENST00000394299 DAZAP2Q15038 168 aaPredicted RBP12.99□□□□□ -0.33
GPC3-202ENST00000394299 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 ZNF767PQ75MW2 155 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 C5orf24Q7Z6I8 188 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 ZNF611Q8N823 705 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 ZSCAN4Q8NAM6 433 aaPredicted RBP12.99□□□□□ -0.33
GPC3-202ENST00000394299 OR10AD1Q8NGE0 317 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 HPSE2Q8WWQ2 592 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 TMEM230Q96A57 120 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 GPR132Q9UNW8 380 aa12.99□□□□□ -0.33
GPC3-202ENST00000394299 TBPP20226 339 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 MPGP29372 298 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 SEC61A1P61619 476 aaKnown RBP12.98□□□□□ -0.33
GPC3-202ENST00000394299 MRPL21Q7Z2W9 205 aaKnown RBP12.98□□□□□ -0.33
GPC3-202ENST00000394299 OSR2Q8N2R0 312 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 CITED4Q96RK1 184 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 RTBDNQ9BSG5 229 aaPredicted RBP12.98□□□□□ -0.33
GPC3-202ENST00000394299 ATMQ13315 3056 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 M0R233 179 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 LYZL6O75951 148 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 IL2RAP01589 272 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 ARR3P36575 388 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 DHODHQ02127 395 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 PLP2Q04941 152 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 SLC9A3R2Q15599 337 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 CHRFAM7AQ494W8 412 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 OVCH2Q7RTZ1 564 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 OR5AP2Q8NGF4 316 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 APOBEC3DQ96AK3 386 aaPredicted RBP12.98□□□□□ -0.33
GPC3-202ENST00000394299 C1QTNF6Q9BXI9 259 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 LIME1Q9H400 295 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 IL36RNQ9UBH0 155 aa12.98□□□□□ -0.33
GPC3-202ENST00000394299 CHATP28329 748 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 CBX5P45973 191 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 HAAOP46952 286 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 IGFL2Q6UWQ7 119 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 RFPL4BQ6ZWI9 263 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 OR5M8Q8NGP6 311 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 MITD1Q8WV92 249 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 SLAMF9Q96A28 289 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 PPA2Q9H2U2 334 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 KCNMB2Q9Y691 235 aa12.97□□□□□ -0.33
GPC3-202ENST00000394299 KCNAB3O43448 404 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 ZMYND11Q15326 602 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 MPPED2Q15777 294 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 Q6ZPA2 131 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 LHFPL1Q86WI0 220 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 FAM219AQ8IW50 185 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 ARRDC1Q8N5I2 433 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 CCDC120Q96HB5 630 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 ZNF75AQ96N20 296 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 TAAR6Q96RI8 345 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 PDCD10Q9BUL8 212 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 CLEC4MQ9H2X3 399 aaPredicted RBP12.96□□□□□ -0.33
GPC3-202ENST00000394299 ATPIF1Q9UII2 106 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 OSGIN2Q9Y236 505 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 EEF1E1-BLOC1S5C9J1V9 151 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 IGHG3P01860 377 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 COX5BP10606 129 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 BCL3P20749 454 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 IGHV1-2P23083 117 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 MALLQ13021 153 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 STK11Q15831 433 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 CNEP1R1Q8N9A8 125 aa12.96□□□□□ -0.33
GPC3-202ENST00000394299 CMSS1Q9BQ75 279 aaKnown RBP12.96□□□□□ -0.33
GPC3-202ENST00000394299 CACNA1GO43497 2377 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 C13orf42A0A1B0GVH6 325 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 CD300LBA8K4G0 201 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 ZNF732B4DXR9 585 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 SS18L1O75177 396 aaPredicted RBP12.95□□□□□ -0.34
GPC3-202ENST00000394299 DUSP1P28562 367 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 APLNRP35414 380 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 NUBP1P53384 320 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 SUPT4H1P63272 117 aaKnown RBP12.95□□□□□ -0.34
GPC3-202ENST00000394299 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
GPC3-202ENST00000394299 OR2T2Q6IF00 324 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 TMUB2Q71RG4 321 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 PXT1Q8NFP0 134 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 MARS2Q96GW9 593 aaKnown RBP12.95□□□□□ -0.34
GPC3-202ENST00000394299 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 ARL6Q9H0F7 186 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 PQLC2LA1A4F0 135 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 OR7C1O76099 320 aaPredicted RBP12.95□□□□□ -0.34
GPC3-202ENST00000394299 KNG1P01042 644 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms