RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 OPA3Q9H6K4 179 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 MTCH1Q9NZJ7 389 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 ZNF107Q9UII5 783 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-203ENST00000394181 ST3GAL6Q9Y274 331 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 NBEAQ8NFP9 2946 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 IGHV1-18A0A0C4DH31 117 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 SYNGR1O43759 233 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 BMP5P22003 454 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 SNU13P55769 128 aaKnown RBP16.31■□□□□ 0.2
CLDND1-203ENST00000394181 MICBQ29980 383 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 RNASE10Q5GAN6 216 aaKnown RBP16.31■□□□□ 0.2
CLDND1-203ENST00000394181 SLC36A1Q7Z2H8 476 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 FTMTQ8N4E7 242 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 OR5A2Q8NGI9 324 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 S100PBPQ96BU1 408 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 OCSTAMPQ9BR26 566 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLDND1-203ENST00000394181 IL36RNQ9UBH0 155 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 ANAPC10Q9UM13 185 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 SLC25A15Q9Y619 301 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 RELNP78509 3460 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 IGHV3-64DA0A0J9YX35 117 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 PSG7Q13046 419 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 GLDNQ6ZMI3 551 aaPredicted RBP16.3■□□□□ 0.2
CLDND1-203ENST00000394181 C22orf34Q6ZV56 151 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 OR10AD1Q8NGE0 317 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 OR4K15Q8NH41 348 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 CAPSLQ8WWF8 208 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 ZNF488Q96MN9 340 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 SULT4A1Q9BR01 284 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 IL36GQ9NZH8 169 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 FZR1Q9UM11 496 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 IGKV1D-8A0A087WSZ0 117 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 A0A0G2JNJ9 132 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 A0A1B0GUH1 482 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 C1QTNF9BB2RNN3 333 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 ZNF780AO75290 641 aaPredicted RBP16.3■□□□□ 0.2
CLDND1-203ENST00000394181 IGLV1-44P01699 117 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 C1QTNF9P0C862 333 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 CALCRP30988 508 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 ZFP69Q49AA0 526 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 C17orf78Q8N4C9 275 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 KLF14Q8TD94 323 aaPredicted RBP16.3■□□□□ 0.2
CLDND1-203ENST00000394181 HIST1H2AAQ96QV6 131 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 Q9UFV3 132 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 ZGRF1Q86YA3 2104 aa16.3■□□□□ 0.2
CLDND1-203ENST00000394181 ADGRG4Q8IZF6 3080 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 PRRG2O14669 202 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 SSNA1O43805 119 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 NAT1P18440 290 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 MECP2P51608 486 aaKnown RBP16.29■□□□□ 0.2
CLDND1-203ENST00000394181 FAM27E3Q08E93 113 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 KCNJ8Q15842 424 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 HAGHLQ6PII5 290 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-203ENST00000394181 C17orf107Q6ZR85 190 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 MARS2Q96GW9 593 aaKnown RBP16.29■□□□□ 0.2
CLDND1-203ENST00000394181 MPC1Q9Y5U8 109 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 PIEZO1Q92508 2521 aa16.29■□□□□ 0.2
CLDND1-203ENST00000394181 CHATP28329 748 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 WDR86Q86TI4 376 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 ZSCAN4Q8NAM6 433 aaPredicted RBP16.28■□□□□ 0.2
CLDND1-203ENST00000394181 EMG1Q92979 244 aaKnown RBP16.28■□□□□ 0.2
CLDND1-203ENST00000394181 SFXN3Q9BWM7 321 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 AK3Q9UIJ7 227 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 SMG1Q96Q15 3661 aaKnown RBP16.28■□□□□ 0.2
CLDND1-203ENST00000394181 IGHV2OR16-5A0A0B4J2B6 119 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 OR2AT4A6NND4 320 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 SERPINE3A8MV23 424 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 H0YL77 283 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 ZNF83P51522 516 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 UCNP55089 124 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 RBM11P57052 281 aaKnown RBP16.28■□□□□ 0.2
CLDND1-203ENST00000394181 CD276Q5ZPR3 534 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 TCTE3Q8IZS6 198 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 ZNF69Q9UC07 566 aa16.28■□□□□ 0.2
CLDND1-203ENST00000394181 FAM221AA4D161 298 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 EEF1E1-BLOC1S5C9J1V9 151 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 J3QW42 95 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 RHBDL1O75783 438 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 UBE2MP61081 183 aaKnown RBP16.27■□□□□ 0.2
CLDND1-203ENST00000394181 MEF2DQ14814 521 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 METTL11BQ5VVY1 283 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 TMED4Q7Z7H5 227 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 HOGA1Q86XE5 327 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 LIX1LQ8IVB5 337 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 FN3KRPQ9HA64 309 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 SCP2D1Q9UJQ7 156 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 ZNF222Q9UK12 451 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 VSIG4Q9Y279 399 aa16.27■□□□□ 0.2
CLDND1-203ENST00000394181 UBE2QL1A1L167 161 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 A8MXE2 369 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 DISC1C4P0D8 188 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 SDCBPO00560 298 aaPredicted RBP16.27■□□□□ 0.19
CLDND1-203ENST00000394181 PRAF2O60831 178 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 SULT1A3P0DMM9 295 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 SULT1A4P0DMN0 295 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 RAC2P15153 192 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 SELEP16581 610 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 DUSP1P28562 367 aa16.27■□□□□ 0.19
CLDND1-203ENST00000394181 EIF2S3LQ2VIR3 472 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms