RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 COL9A2Q14055 689 aaPredicted RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 IHHQ14623 411 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 OR1Q1Q15612 314 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 KCNMB1Q16558 191 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF684Q5T5D7 378 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 KIAA0895LQ68EN5 471 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 FIGLAQ6QHK4 219 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF765Q7L2R6 523 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 BHLHA9Q7RTU4 235 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF550Q7Z398 422 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 WDFY1Q8IWB7 410 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 SLC38A9Q8NBW4 561 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 PFN4Q8NHR9 129 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 EMG1Q92979 244 aaKnown RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 Q96M85 177 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 TMEM106BQ9NUM4 274 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 HHLA2Q9UM44 414 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 RCL1Q9Y2P8 373 aaKnown RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 CDC14CA4D256 554 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 NPIPB15A6NHN6 443 aaPredicted RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 A8MVM7 634 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 J3QW42 95 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 GOSR1O95249 250 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 PSG1P11464 419 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 KITLGP21583 273 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 CCNOP22674 350 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 MED25Q71SY5 747 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 SLC25A43Q8WUT9 341 aaPredicted RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 RNF126Q9BV68 326 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 C1orf198Q9H425 327 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 ELOVL3Q9HB03 270 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 A0A0U1RQV5 110 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 HSD17B6O14756 317 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 VAMP5O95183 116 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 PPBPP02775 128 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 CEBPBP17676 345 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 DUSP3P51452 185 aaPredicted RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 HGFACQ04756 655 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 OOSP2Q86WS3 158 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 GKN2Q86XP6 184 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 OR4F5Q8NH21 305 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 LHX4Q969G2 390 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 OR4F4Q96R69 305 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 NICN1Q9BSH3 213 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 COPS7AQ9UBW8 275 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 RALYQ9UKM9 306 aaKnown RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 MRPS2Q9Y399 296 aaKnown RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 E9PQ18 207 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ERI3O43414 337 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 NUDT21O43809 227 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 NUDT14O95848 222 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 STATHP02808 62 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 OTX2P32243 289 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 SLC6A12P48065 614 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CKS1BP61024 79 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CISD2Q8N5K1 135 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 LMX1AQ8TE12 382 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 C20orf144Q9BQM9 153 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 PHPT1Q9NRX4 125 aaPredicted RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 LHX3Q9UBR4 397 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 RHBDD3Q9Y3P4 386 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 FIGNL2A6NMB9 653 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 K7EQM0 130 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 SLCO2B1O94956 709 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 DUSP1P28562 367 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ARL4DP49703 201 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 GAS1P54826 345 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 BAXQ07812 192 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF695Q8IW36 515 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 OR8I2Q8N0Y5 310 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 OR10G6Q8NH81 332 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 SLAMF6Q96DU3 332 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 NUS1Q96E22 293 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 LPAR5Q9H1C0 372 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 IGLV3-10A0A075B6K4 115 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 TRBV24-1A0A075B6N3 115 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 H0YIZ8 118 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 K7EP13 123 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CDC42EP2O14613 210 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 PDE6DO43924 150 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 TMPRSS11DO60235 418 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 GDF9O60383 454 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 NTN1O95631 604 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 HRASP01112 189 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CXCL10P02778 98 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 MELTFP08582 738 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 HNRNPA1P09651 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 MGST1P10620 155 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CTSEP14091 401 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 HIST1H1CP16403 213 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 GNB3P16520 340 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 PGCP20142 388 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 RPS4Y1P22090 263 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 HSD11B2P80365 405 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 WBP2NLQ6ICG8 309 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 RCBTB1Q8NDN9 531 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms