RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ECHDC3Q96DC8 303 aa-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 THUMPD2Q9BTF0 503 aaKnown RBP-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 NDUFB11Q9NX14 153 aa-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 JCADQ9P266 1359 aa-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 TAC3Q9UHF0 121 aa-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 STK38LQ9Y2H1 464 aa-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 PPIL1Q9Y3C6 166 aa-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 URGCP-MRPS24S4R325 110 aa-1.02□□□□□ -2.57
RNU6-239P-201ENST00000390990 PLCH2O75038 1416 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 USP42Q9H9J4 1324 aaKnown RBP-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 A0A1B0GWJ7 208 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 VPS37CA5D8V6 355 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 SLC16A7O60669 478 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 SNRPAP09012 282 aaKnown RBP-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 OR4Q2P0C623 313 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 CD36P16671 472 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 HLA-GP17693 338 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 OR1E1P30953 314 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 FABP6P51161 128 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 C6orf226Q5I0X4 101 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 CERS6Q6ZMG9 384 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 PRNTQ86SH4 94 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 CMTM1Q8IZ96 169 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 OR5T3Q8NGG3 340 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 ZNRF2Q8NHG8 242 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 ADAT1Q9BUB4 502 aaKnown RBP-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 TPPP3Q9BW30 176 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 PXMP2Q9NR77 195 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 CCDC59Q9P031 241 aaKnown RBP-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 KNSTRNQ9Y448 316 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 HEATR5BQ9P2D3 2071 aa-1.03□□□□□ -2.57
RNU6-239P-201ENST00000390990 ANKRD17O75179 2603 aaKnown RBP-1.03□□□□□ -2.58
RNU6-239P-201ENST00000390990 CNTRLQ7Z7A1 2325 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 FAM170AA1A519 330 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 TSPAN11A1L157 253 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 PRPSAP2O60256 369 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 SNNO75324 88 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 IDH1O75874 414 aaKnown RBP-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 IL1BP01584 269 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 ANXA5P08758 320 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 GAP43P17677 238 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 GABRG2P18507 467 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 RAB4AP20338 218 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 GLRA2P23416 452 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 CRYBB2P43320 205 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 SEC61GP60059 68 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 OR1Q1Q15612 314 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 TMEM241Q24JQ0 296 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 FBXL19-AS1Q494R0 122 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 VPS26BQ4G0F5 336 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 FAM229BQ4G0N7 80 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 STEAP4Q687X5 459 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 PDPK2PQ6A1A2 396 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 OR9K2Q8NGE7 335 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 MGARPQ8TDB4 240 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 MAL2Q969L2 176 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 SMARCD1Q96GM5 515 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 FAM19A4Q96LR4 140 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 NAPGQ99747 312 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 C1orf21Q9H246 121 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 NIT2Q9NQR4 276 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 SLC35D1Q9NTN3 355 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 ZNF257Q9Y2Q1 563 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 KIF3AQ9Y496 699 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 HEY1Q9Y5J3 304 aa-1.04□□□□□ -2.58
RNU6-239P-201ENST00000390990 ZNF106Q9H2Y7 1883 aaKnown RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 MROH7Q68CQ1 1323 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 ZNF705FA8MVS1 300 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 M0R3G1 203 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 PRMT5O14744 637 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 GEMIN2O14893 280 aaKnown RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 GYG2O15488 501 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 ERI3O43414 337 aaKnown RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 PSKH1P11801 424 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 GTF2F2P13984 249 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 GPX2P18283 190 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 ATF1P18846 271 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 ELK4P28324 431 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 RAP1GDS1P52306 607 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 RAB11AP62491 216 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 SRSF6Q13247 344 aaKnown RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 PSG3Q16557 428 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 FAM27D1Q5T7N8 215 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 CMC1Q7Z7K0 106 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 ZFAND2AQ8N6M9 145 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 ZNF439Q8NDP4 499 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 OR5AR1Q8NGP9 310 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 OR1S1Q8NH92 325 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 APH1AQ96BI3 265 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 MRPS24Q96EL2 167 aaKnown RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 DYNLL2Q96FJ2 89 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 SRRQ9GZT4 340 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 RAB33BQ9H082 229 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 TMEM38AQ9H6F2 299 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 LINC00588Q9Y4M8 146 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 ASB3Q9Y575 518 aa-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 UBR5O95071 2799 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-239P-201ENST00000390990 MUC2Q02817 5179 aa-1.06□□□□□ -2.58
RNU6-239P-201ENST00000390990 USP47Q96K76 1375 aa-1.06□□□□□ -2.58
RNU6-239P-201ENST00000390990 ATP8B3O60423 1300 aa-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms