RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PSMB6P28072 239 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 BPIFB3P59826 476 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 UBE2KP61086 200 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 TIPARPQ7Z3E1 657 aaKnown RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 MRGPRDQ8TDS7 321 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 CNTD2Q9H8S5 307 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 TAF9BQ9HBM6 251 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 HES4Q9HCC6 221 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 PURGQ9UJV8 347 aaKnown RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 E5RGE8 158 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 TAAR5O14804 337 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 PRSS23O95084 383 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 ZP4Q12836 540 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 WNT2BQ93097 391 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 ERGIC1Q969X5 290 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 TMEM56Q96MV1 263 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 OPN3Q9H1Y3 402 aaPredicted RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 C19orf12Q9NSK7 152 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 NSG2Q9Y328 171 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 CDIPTO14735 213 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 UPK3AO75631 287 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 CTSBP07858 339 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 NPBWR1P48145 328 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 C8orf82Q6P1X6 216 aaPredicted RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 GNPNAT1Q96EK6 184 aaPredicted RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 FLVCR2Q9UPI3 526 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 TIAF1O95411 115 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 OR3A1P47881 315 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 KLRB1Q12918 225 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 ZNF239Q16600 458 aaKnown RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 C17orf107Q6ZR85 190 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 C1orf174Q8IYL3 243 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 DRAXINQ8NBI3 349 aaPredicted RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 RNF133Q8WVZ7 376 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 C2orf50Q96LR7 162 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 PIGMQ9H3S5 423 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 PLEKHA2Q9HB19 425 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 TREM2Q9NZC2 230 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 CYTIPO60759 359 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 ACKR3P25106 362 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 HOXA6P31267 233 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 MAGEB1P43366 347 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 SNTB1Q13884 538 aaKnown RBP9.05□□□□□ -0.96
PKP4-201ENST00000389757 PLA1AQ53H76 456 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 PPP1R32Q7Z5V6 425 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 ADIPOR1Q96A54 375 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 GUCD1Q96NT3 240 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 MAGT1Q9H0U3 335 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 SCN3AQ9NY46 2000 aa9.05□□□□□ -0.96
PKP4-201ENST00000389757 ASXL3Q9C0F0 2248 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 A0A1B0GUH1 482 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 RPS10-NUDT3A0A1W2PQS6 291 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 SNRPGP15A8MWD9 76 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 KRASP01116 189 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 CTSSP25774 331 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 CRYBB2P43320 205 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 UBE2MP61081 183 aaKnown RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 TMEM128Q5BJH2 165 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 SLC26A10Q8NG04 563 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 MOB3AQ96BX8 217 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 PUS1Q9Y606 427 aaKnown RBP eCLIP9.04□□□□□ -0.96
PKP4-201ENST00000389757 NUP214P35658 2090 aaPredicted RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 J3QT63 122 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 K7ESF4 209 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 FCGR3BO75015 233 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 JTBO76095 146 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 SULT1A3P0DMM9 295 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 SULT1A4P0DMN0 295 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 GABRB1P18505 474 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 INSL4Q14641 139 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 COL19A1Q14993 1142 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 Q3ZCU0 254 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 TMUB2Q71RG4 321 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 ZNF230Q9UIE0 474 aaPredicted RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 IGHV3-43A0A0B4J1X8 118 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 TRAPPC2P0DI81 140 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 TRAPPC2BP0DI82 140 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 IGHV3-43DP0DP04 118 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 MGST1P10620 155 aaKnown RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 SPINK2P20155 84 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 UBE2G1P62253 170 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 DMKNQ6E0U4 476 aaPredicted RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 ZNF770Q6IQ21 691 aaPredicted RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 ASCL5Q7RTU5 278 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 C15orf54Q8N8G6 183 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 CLEC18AA5D8T8 446 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 GDF9O60383 454 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 DXOO77932 396 aaKnown RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 OR2F2O95006 317 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 CSRP1P21291 193 aaKnown RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 FPR2P25090 351 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 BRS3P32247 399 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 GZMMP51124 257 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 OR2F1Q13607 317 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 INPP5JQ15735 1006 aaPredicted RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 ZFP62Q8NB50 900 aaPredicted RBP9.04□□□□□ -0.96
PKP4-201ENST00000389757 CLEC18CQ8NCF0 446 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms