RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 METTL8Q9H825 291 aaKnown RBP13□□□□□ -0.33
SCFD2-201ENST00000388940 TAS2R3Q9NYW6 316 aa13□□□□□ -0.33
SCFD2-201ENST00000388940 DOCK10Q96BY6 2186 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 GDF1P27539 372 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 NKAPLQ5M9Q1 402 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 UQCC3Q6UW78 93 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 BAP18Q8IXM2 172 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 TECTBQ96PL2 329 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 ZNF2Q9BSG1 426 aaPredicted RBP12.99□□□□□ -0.33
SCFD2-201ENST00000388940 LDAHQ9H6V9 325 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 TMEM100Q9NV29 134 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 C1orf123Q9NWV4 160 aa12.99□□□□□ -0.33
SCFD2-201ENST00000388940 BOKQ9UMX3 212 aaPredicted RBP12.99□□□□□ -0.33
SCFD2-201ENST00000388940 PINLYPA6NC86 204 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 MPTX1A8MV57 137 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 MSTNO14793 375 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 SPRY1O43609 319 aaPredicted RBP12.98□□□□□ -0.33
SCFD2-201ENST00000388940 ANGPTL7O43827 346 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 IFNA2P01563 188 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 S100A6P06703 90 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 MMP7P09237 267 aaPredicted RBP12.98□□□□□ -0.33
SCFD2-201ENST00000388940 CHATP28329 748 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 PTGER4P35408 488 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 HAAOP46952 286 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 FUT6P51993 359 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 FAM3AP98173 230 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 OR8B8Q15620 311 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 DHRS11Q6UWP2 260 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 UNQ6126/PRO20091Q6UXV3 157 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 RAB11FIP2Q7L804 512 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 SKA3Q8IX90 412 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 ZBTB44Q8NCP5 570 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 FGFBP3Q8TAT2 258 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 POM121Q96HA1 1249 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 FAAP24Q9BTP7 215 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 PRR13Q9NZ81 148 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 AK3Q9UIJ7 227 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 MEMO1Q9Y316 297 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 IGKV3D-15A0A087WSY6 115 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 RAB19A4D1S5 217 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 KCNAB3O43448 404 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 XRCC2O43543 280 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 PATE4P0C8F1 98 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 TAF9Q16594 264 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 SPSB4Q96A44 273 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 HDHD3Q9BSH5 251 aaPredicted RBP12.98□□□□□ -0.33
SCFD2-201ENST00000388940 PRELID3BQ9Y3B1 194 aa12.98□□□□□ -0.33
SCFD2-201ENST00000388940 BTN1A1Q13410 526 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 ZNF273Q14593 569 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 ELP2Q6IA86 826 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
SCFD2-201ENST00000388940 C1QTNF5Q9BXJ0 243 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 LINC00470Q9BZP3 86 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 PRDM14Q9GZV8 571 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 SMOC1Q9H4F8 434 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 BCO1Q9HAY6 547 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 PCDHB16Q9NRJ7 776 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 NECAP2Q9NVZ3 263 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 OR5AC2Q9NZP5 309 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 PMS2P1A4D2B8 440 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 CRYM-AS1A6NIL9 109 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 FARS2O95363 451 aaKnown RBP12.97□□□□□ -0.33
SCFD2-201ENST00000388940 KNG1P01042 644 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 OR5H8P0DN80 308 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 CD79AP11912 226 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 RBMXP38159 391 aaKnown RBP12.97□□□□□ -0.33
SCFD2-201ENST00000388940 ZNF92Q03936 586 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 RAB32Q13637 225 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 SGPP2Q8IWX5 399 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 OSR2Q8N2R0 312 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 ABHD3Q8WU67 409 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 ZNF845Q96IR2 970 aaPredicted RBP12.97□□□□□ -0.33
SCFD2-201ENST00000388940 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
SCFD2-201ENST00000388940 IGKV1-12A0A0C4DH73 117 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 ZNF816-ZNF321PA0A0X1KG74 233 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 NUDT19A8MXV4 375 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 IGKV1D-12P01611 117 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 FCGR3AP08637 254 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 PMELP40967 661 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 PDZK1IP1Q13113 114 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 RBM39Q14498 530 aaKnown RBP12.96□□□□□ -0.33
SCFD2-201ENST00000388940 COLCA1Q6ZS62 124 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 RNF141Q8WVD5 230 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 THOC3Q96J01 351 aaKnown RBP12.96□□□□□ -0.33
SCFD2-201ENST00000388940 SULT4A1Q9BR01 284 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 PCDHB10Q9UN67 800 aa12.96□□□□□ -0.33
SCFD2-201ENST00000388940 MSGN1A6NI15 193 aa12.96□□□□□ -0.34
SCFD2-201ENST00000388940 PRSS44E7EML9 344 aa12.96□□□□□ -0.34
SCFD2-201ENST00000388940 HOXB5P09067 269 aa12.96□□□□□ -0.34
SCFD2-201ENST00000388940 AIMP2Q13155 320 aaKnown RBP12.96□□□□□ -0.34
SCFD2-201ENST00000388940 LILRB2Q8N423 598 aa12.96□□□□□ -0.34
SCFD2-201ENST00000388940 BPIFCQ8NFQ6 507 aa12.96□□□□□ -0.34
SCFD2-201ENST00000388940 OR1S2Q8NGQ3 325 aa12.96□□□□□ -0.34
SCFD2-201ENST00000388940 SLC5A7Q9GZV3 580 aa12.96□□□□□ -0.34
SCFD2-201ENST00000388940 MS4A7Q9GZW8 240 aaPredicted RBP12.96□□□□□ -0.34
SCFD2-201ENST00000388940 TAAR5O14804 337 aa12.95□□□□□ -0.34
SCFD2-201ENST00000388940 EDN3P14138 238 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms