RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 OR4A8P0C604 315 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 JMJD7P0C870 316 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 TMEM187Q14656 261 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 FBXW12Q6X9E4 464 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 TOMM40LQ969M1 308 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 PECRQ9BY49 303 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 NXF5Q9H1B4 397 aaKnown RBP13.13□□□□□ -0.31
CTNS-202ENST00000381870 FAM60AQ9NP50 221 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 PRTFDC1Q9NRG1 225 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 MRPS23Q9Y3D9 190 aaKnown RBP13.13□□□□□ -0.31
CTNS-202ENST00000381870 CPAMD8Q8IZJ3 1885 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 FAM221AA4D161 298 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 FAM24AA6NFZ4 105 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 OMGP23515 440 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 SFTPA2Q8IWL1 248 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 OR10S1Q8NGN2 331 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 HAS2Q92819 552 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 VWCEQ96DN2 955 aa13.13□□□□□ -0.31
CTNS-202ENST00000381870 MCTS1Q9ULC4 181 aaKnown RBP13.13□□□□□ -0.31
CTNS-202ENST00000381870 AHSA1O95433 338 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 MT-ATP6P00846 226 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 AKT2P31751 481 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 CSNK1A1P48729 337 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 RND2P52198 227 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 COL10A1Q03692 680 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 FOXF1Q12946 379 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 ABHD12BQ7Z5M8 362 aaPredicted RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 OR1P1Q8NH06 330 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 CLDND2Q8NHS1 167 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 FAM71F1Q96KD3 344 aaPredicted RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 CDH20Q9HBT6 801 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 PCNX3Q9H6A9 2034 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 H0YIG0 161 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 STMND1H3BQB6 276 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 CLDN34H7C241 214 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 ST8SIA3O43173 380 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 IL33O95760 270 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 MMP7P09237 267 aaPredicted RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 RPS21P63220 83 aaKnown RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 GPM6BQ13491 265 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 IL13RA2Q14627 380 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 ABLIM2Q6H8Q1 611 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 CPEB2Q7Z5Q1 589 aaKnown RBP13.12□□□□□ -0.31
CTNS-202ENST00000381870 FBXL14Q8N1E6 418 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 BOD1Q96IK1 185 aa13.12□□□□□ -0.31
CTNS-202ENST00000381870 CHD7Q9P2D1 2997 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 FOXI3A8MTJ6 420 aaPredicted RBP13.11□□□□□ -0.31
CTNS-202ENST00000381870 H0Y8X5 98 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 RAB4AP20338 218 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 NOVA1P51513 510 aaKnown RBP13.11□□□□□ -0.31
CTNS-202ENST00000381870 TDGF1P3P51864 188 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 SLC37A1P57057 533 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 H3F3AP84243 136 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 OGFOD3Q6PK18 319 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 FAM89BQ8N5H3 189 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 METTL27Q8N6F8 245 aaPredicted RBP13.11□□□□□ -0.31
CTNS-202ENST00000381870 GPR119Q8TDV5 335 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 TMEM171Q8WVE6 324 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 NAA60Q9H7X0 242 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 ZNF319Q9P2F9 582 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 THAP10Q9P2Z0 257 aaPredicted RBP13.11□□□□□ -0.31
CTNS-202ENST00000381870 SLC7A11Q9UPY5 501 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 B3GALT1Q9Y5Z6 326 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 FAM230AA0A1W2PPH8 454 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 IGSF23A1L1A6 192 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 FAM221BA6H8Z2 402 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 DFFBO76075 338 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 IGHMP01871 453 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 NPSP0C0P6 89 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 ZNF17P17021 662 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 RAB11AP62491 216 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 PHLDA2Q53GA4 152 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 C6orf201Q7Z4U5 140 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 TMEM123Q8N131 208 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 OR10J5Q8NHC4 309 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 C11orf40Q8WZ69 217 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 ADGRG7Q96K78 797 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 SYT3Q9BQG1 590 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 CABLES2Q9BTV7 478 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 CALHM2Q9HA72 323 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 MED29Q9NX70 200 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 DKKL1Q9UK85 242 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
CTNS-202ENST00000381870 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 IGKV1-9A0A0C4DH69 117 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 A0A1B0GU03 582 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 CDC14CA4D256 554 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 A6NNC1 897 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 B4DEV8 164 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 M0R143 59 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 MSTNO14793 375 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 DUSP1P28562 367 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 IGLV3-21P80748 117 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms