RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SPRY1O43609 319 aaPredicted RBP13.48□□□□□ -0.25
SNRPB-201ENST00000381342 MSMBP08118 114 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4L2P0CJ85 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4L3P0CJ86 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4L4P0CJ87 422 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4L5P0CJ88 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4L6P0CJ89 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4L7P0CJ90 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 MUC1P15941 1255 aaPredicted RBP13.48□□□□□ -0.25
SNRPB-201ENST00000381342 CPEP16870 476 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 FSTP19883 344 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 RPS25P62851 125 aaKnown RBP13.48□□□□□ -0.25
SNRPB-201ENST00000381342 PPP3R1P63098 170 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 LCN2P80188 198 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 TPBGQ13641 420 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 KCNJ8Q15842 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 STUMQ69YW2 141 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4L9Q6RFH8 374 aaPredicted RBP13.48□□□□□ -0.25
SNRPB-201ENST00000381342 OR5T2Q8NGG2 359 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 OR8B3Q8NGG8 313 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 OR51F2Q8NH61 342 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 TMEM158Q8WZ71 300 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 TMIGD2Q96BF3 282 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 NEIL1Q96FI4 390 aaPredicted RBP13.48□□□□□ -0.25
SNRPB-201ENST00000381342 OR8B2Q96RD0 313 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 NRIP2Q9BQI9 281 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 NEK6Q9HC98 313 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 NLKQ9UBE8 527 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 DUX4Q9UBX2 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 MIOXQ9UGB7 285 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 ARHGAP32A7KAX9 2087 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 MAGEA13PA6NCF6 341 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 PIN1P1O15428 100 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 PHF1O43189 567 aaPredicted RBP13.47□□□□□ -0.25
SNRPB-201ENST00000381342 ALX3O95076 343 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 NXPH2O95156 264 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 WNT2P09544 360 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 IGFBP3P17936 291 aaPredicted RBP13.47□□□□□ -0.25
SNRPB-201ENST00000381342 PITPNBP48739 271 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 GPR50Q13585 617 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 KISS1Q15726 138 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 SMIM21Q3B7S5 101 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 ESCO2Q56NI9 601 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 ACP7Q6ZNF0 438 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 IL17RELQ6ZVW7 336 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 NLRC3Q7RTR2 1065 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 PHC2Q8IXK0 858 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 TEX29Q8N6K0 151 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 OR52N4Q8NGI2 321 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 TMEM203Q969S6 136 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 TMEM186Q96B77 213 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 CEP19Q96LK0 163 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 CCL13Q99616 98 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 NOX4Q9NPH5 578 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 MTCH1Q9NZJ7 389 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 CKLFQ9UBR5 152 aa13.47□□□□□ -0.25
SNRPB-201ENST00000381342 TRAV20A0A0B4J274 112 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 OR2AT4A6NND4 320 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 F8VVB4 439 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 F8VWA3 439 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 TNFRSF13BO14836 293 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-201ENST00000381342 ANGPTL7O43827 346 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 NOS1APO75052 506 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-201ENST00000381342 TNFAIP8O95379 198 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 SELLP14151 372 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 ZFP36P26651 326 aaKnown RBP13.46□□□□□ -0.25
SNRPB-201ENST00000381342 MAPK3P27361 379 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-201ENST00000381342 PSMB9P28065 219 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 ZP1P60852 638 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 ERVK11-1P61568 191 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 GNB2P62879 340 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 PDZK1IP1Q13113 114 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 SSX1Q16384 188 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 ACSM3Q53FZ2 586 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 ARMCX4Q5H9R4 360 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 DDI2Q5TDH0 399 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 UBE2UQ5VVX9 321 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 SATL1Q86VE3 508 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 MS4A15Q8N5U1 240 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 FAM216BQ8N7L0 139 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 THRSPQ92748 146 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 C12orf43Q96C57 262 aaKnown RBP13.46□□□□□ -0.25
SNRPB-201ENST00000381342 MDFIQ99750 246 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 SSBP3Q9BWW4 388 aaPredicted RBP13.46□□□□□ -0.25
SNRPB-201ENST00000381342 HES4Q9HCC6 221 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 SMURF1Q9HCE7 757 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 HIF1ANQ9NWT6 349 aa13.46□□□□□ -0.25
SNRPB-201ENST00000381342 ANK3Q12955 4377 aaKnown RBP13.46□□□□□ -0.26
SNRPB-201ENST00000381342 DOCK11Q5JSL3 2073 aa13.46□□□□□ -0.26
SNRPB-201ENST00000381342 IGKV1D-17A0A075B6S4 117 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 IGKV1-12A0A0C4DH73 117 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 NKX6-3A6NJ46 265 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 A8MXK9 166 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 GABRPO00591 440 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 TMPRSS2O15393 492 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 MAGEB3O15480 346 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 NDUFA2O43678 99 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 FCN3O75636 299 aa13.45□□□□□ -0.26
SNRPB-201ENST00000381342 SC5DO75845 299 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms