RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 A0A096LNT2 108 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 MEGF11A6BM72 1044 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 AIREO43918 545 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 TMEM225BP0DP42 221 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 SLC25A16P16260 332 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 GLRA1P23415 457 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 TGFBR1P36897 503 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 PTGFRP43088 359 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 NPBWR2P48146 333 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 ERVK11-1P61568 191 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 TEX36Q5VZQ5 186 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 GPR141Q7Z602 305 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 LRRC28Q86X40 367 aaPredicted RBP10.61□□□□□ -0.71
SMN1-202ENST00000380707 CDH26Q8IXH8 852 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 MKXQ8IYA7 352 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 NKAIN3Q8N8D7 197 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 TNFAIP8L1Q8WVP5 186 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 CPNE2Q96FN4 548 aaPredicted RBP10.61□□□□□ -0.71
SMN1-202ENST00000380707 FAM192AQ9GZU8 254 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 GSTK1Q9Y2Q3 226 aa10.61□□□□□ -0.71
SMN1-202ENST00000380707 IGHV4-61A0A0C4DH41 118 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 ISPDA4D126 451 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 OOEPA6NGQ2 149 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 NXPH2O95156 264 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 CDRT1O95170 752 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 FSTL3O95633 263 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 CYB5AP00167 134 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 CD37P11049 281 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 BCL3P20749 454 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 MDH2P40926 338 aaKnown RBP10.6□□□□□ -0.71
SMN1-202ENST00000380707 LSM3P62310 102 aaKnown RBP10.6□□□□□ -0.71
SMN1-202ENST00000380707 TIMM50Q3ZCQ8 353 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 GDPGP1Q6ZNW5 385 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 SLC16A12Q6ZSM3 486 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 FAM90A1Q86YD7 464 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
SMN1-202ENST00000380707 OR5T2Q8NGG2 359 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 OR4D6Q8NGJ1 314 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 CEP19Q96LK0 163 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 KCTD7Q96MP8 289 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 TMEM246Q9BRR3 403 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 UQCC2Q9BRT2 126 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 REG4Q9BYZ8 158 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 NAA50Q9GZZ1 169 aaKnown RBP10.6□□□□□ -0.71
SMN1-202ENST00000380707 HES4Q9HCC6 221 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 SMURF1Q9HCE7 757 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 RBFOX1Q9NWB1 397 aaKnown RBP10.6□□□□□ -0.71
SMN1-202ENST00000380707 ACANP16112 2415 aa10.6□□□□□ -0.71
SMN1-202ENST00000380707 TRAPPC2LH3BP13 241 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 LGALS8O00214 317 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 KDM4BO94953 1096 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 SFTPBP07988 381 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 CALCBP10092 127 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 MUC1P15941 1255 aaPredicted RBP10.59□□□□□ -0.71
SMN1-202ENST00000380707 MYL9P24844 172 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 SDC2P34741 201 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 OR10A3P58181 314 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 MICBQ29980 383 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 ZNF404Q494X3 552 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 ASCL4Q6XD76 172 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 ACP7Q6ZNF0 438 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 NR2C2APQ86WQ0 139 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 ANKRD13BQ86YJ7 626 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 CIARTQ8N365 385 aaPredicted RBP10.59□□□□□ -0.71
SMN1-202ENST00000380707 PNLDC1Q8NA58 520 aaKnown RBP10.59□□□□□ -0.71
SMN1-202ENST00000380707 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 PXT1Q8NFP0 134 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 FOXRED1Q96CU9 486 aaPredicted RBP10.59□□□□□ -0.71
SMN1-202ENST00000380707 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 RASL12Q9NYN1 266 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 DNAJB11Q9UBS4 358 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 ING4Q9UNL4 249 aa10.59□□□□□ -0.71
SMN1-202ENST00000380707 TRAV38-1A0A0B4J264 116 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 SMIM30A4D0T7 59 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 TNFRSF13BO14836 293 aaPredicted RBP10.58□□□□□ -0.72
SMN1-202ENST00000380707 GYPAP02724 150 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 TFF1P04155 84 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 USF1P22415 310 aaPredicted RBP10.58□□□□□ -0.72
SMN1-202ENST00000380707 IL2RGP31785 369 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 MTNR1BP49286 362 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 TMEM155Q4W5P6 130 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 C1orf100Q5SVJ3 147 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 GLIPR1L1Q6UWM5 242 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 SPNS3Q6ZMD2 512 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 Q8IYB0 196 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 MUC20Q8N307 709 aaPredicted RBP10.58□□□□□ -0.72
SMN1-202ENST00000380707 OR10K1Q8NGX5 313 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 CLDND2Q8NHS1 167 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 GAL3ST1Q99999 423 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 ELL3Q9HB65 397 aaPredicted RBP10.58□□□□□ -0.72
SMN1-202ENST00000380707 NLKQ9UBE8 527 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 IL36RNQ9UBH0 155 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
SMN1-202ENST00000380707 MED13LQ71F56 2210 aa10.58□□□□□ -0.72
SMN1-202ENST00000380707 IGKV1D-17A0A075B6S4 117 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms