RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SLC2A12Q8TD20 617 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM37Q8WXS4 190 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 KLHDC3Q9BQ90 382 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 ELL3Q9HB65 397 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 GPR27Q9NS67 375 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 MRPS17Q9Y2R5 130 aaKnown RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 MEMO1Q9Y316 297 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 K7ERU9 68 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 K7ESM1 405 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 K7N7A8 449 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 PSG1P11464 419 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 TUBG1P23258 451 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 ZFP36L1Q07352 338 aaKnown RBP6.59□□□□□ -1.36
CDKL5-201ENST00000379989 ICAM4Q14773 271 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 C2orf76Q3KRA6 126 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 Q499Y3 187 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 LRRC73Q5JTD7 316 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF627Q7L945 461 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 SAXO1Q8IYX7 474 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 LINC01555Q8NAE3 123 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 OR52L1Q8NGH7 329 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 CPT1CQ8TCG5 803 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 IL22RA2Q969J5 263 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 C2orf50Q96LR7 162 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 LPAR4Q99677 370 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 SIRT3Q9NTG7 399 aaPredicted RBP6.59□□□□□ -1.36
CDKL5-201ENST00000379989 P4HTMQ9NXG6 502 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 SMPXQ9UHP9 88 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 WSB1Q9Y6I7 421 aa6.59□□□□□ -1.36
CDKL5-201ENST00000379989 EML5Q05BV3 1969 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 A0A1W2PP55 124 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 SERPINE3A8MV23 424 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 PLPP1O14494 284 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 NUPR1O60356 82 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 ONECUT2O95948 504 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 COMPP49747 757 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-201ENST00000379989 SEC13P55735 322 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 RPS20P60866 119 aaKnown RBP6.58□□□□□ -1.36
CDKL5-201ENST00000379989 HSPB3Q12988 150 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 SCGB2A2Q13296 93 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 MPV17LQ2QL34 196 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 ARHGAP11BQ3KRB8 267 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 C2orf27AQ580R0 203 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 SPSB3Q6PJ21 355 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 PARM1Q6UWI2 310 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 EXD3Q8N9H8 876 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 RNF128Q8TEB7 428 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 PRRX2Q99811 253 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 PYGO2Q9BRQ0 406 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 ALG12Q9BV10 488 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 PLA2G2FQ9BZM2 168 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 WFDC1Q9HC57 220 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 TAC3Q9UHF0 121 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 A0A1W2PQF6 199 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 CDC14CA4D256 554 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 TNFP01375 233 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 OR2T7P0C7T2 308 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 MMP9P14780 707 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 FAHP16930 419 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 LGALS7P47929 136 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 RHOGP84095 191 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 FUT5Q11128 374 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 PRR27Q6MZM9 219 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 GDF7Q7Z4P5 450 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 MDGA2Q7Z553 956 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 SLC35F2Q8IXU6 374 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 OR51L1Q8NGJ5 315 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 OR2T27Q8NH04 317 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 APH1AQ96BI3 265 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 SLCO5A1Q9H2Y9 848 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 TMEM106BQ9NUM4 274 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF107Q9UII5 783 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-201ENST00000379989 SLC45A2Q9UMX9 530 aa6.58□□□□□ -1.36
CDKL5-201ENST00000379989 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 C9orf172C9J069 976 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 HSPB1P04792 205 aaKnown RBP6.57□□□□□ -1.36
CDKL5-201ENST00000379989 KLK1P06870 262 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 CSNK2A2P19784 350 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-201ENST00000379989 HIST1H1TP22492 207 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-201ENST00000379989 MANFP55145 182 aaKnown RBP6.57□□□□□ -1.36
CDKL5-201ENST00000379989 TCEA2Q15560 299 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 ANKRD55Q3KP44 614 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 TMEM182Q6ZP80 229 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF550Q7Z398 422 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 ZNF584Q8IVC4 421 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 TMEM256Q8N2U0 113 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 NPEPL1Q8NDH3 523 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 MARCH1Q8TCQ1 289 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 TMEM230Q96A57 120 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 FAM3DQ96BQ1 224 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 TM4SF19Q96DZ7 209 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 REEP6Q96HR9 211 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 Q96M85 177 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 KXD1Q9BQD3 176 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 MRPL13Q9BYD1 178 aaKnown RBP6.57□□□□□ -1.36
CDKL5-201ENST00000379989 CLN8Q9UBY8 286 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 ICAM5Q9UMF0 924 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 LAMP3Q9UQV4 416 aa6.57□□□□□ -1.36
CDKL5-201ENST00000379989 PRR32B1ATL7 298 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms