RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PHYHIPQ92561 330 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 SLAMF9Q96A28 289 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 NEIL1Q96FI4 390 aaPredicted RBP15.63■□□□□ 0.09
SSU72-203ENST00000378725 CEP19Q96LK0 163 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 DNTTIP1Q9H147 329 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 DNAJB11Q9UBS4 358 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 POLR3KQ9Y2Y1 108 aaPredicted RBP15.63■□□□□ 0.09
SSU72-203ENST00000378725 A8MXK9 166 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 INMTO95050 263 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 PLATP00750 562 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 TGFAP01135 160 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 MSMBP08118 114 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 UCHL1P09936 223 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 RPS2P15880 293 aaKnown RBP15.62■□□□□ 0.09
SSU72-203ENST00000378725 ZFP36P26651 326 aaKnown RBP15.62■□□□□ 0.09
SSU72-203ENST00000378725 POU3F4P49335 361 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 SEC61A1P61619 476 aaKnown RBP15.62■□□□□ 0.09
SSU72-203ENST00000378725 SYT6Q5T7P8 510 aaPredicted RBP15.62■□□□□ 0.09
SSU72-203ENST00000378725 NLRC3Q7RTR2 1065 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 OR5T2Q8NGG2 359 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 OR8B3Q8NGG8 313 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 OR51F2Q8NH61 342 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 RFT1Q96AA3 541 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 CPNE2Q96FN4 548 aaPredicted RBP15.62■□□□□ 0.09
SSU72-203ENST00000378725 OR8B2Q96RD0 313 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 PPIL3Q9H2H8 161 aaKnown RBP15.62■□□□□ 0.09
SSU72-203ENST00000378725 SNTG1Q9NSN8 517 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 NDUFB11Q9NX14 153 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 CTSZQ9UBR2 303 aa15.62■□□□□ 0.09
SSU72-203ENST00000378725 YLPM1P49750 1951 aaKnown RBP15.62■□□□□ 0.09
SSU72-203ENST00000378725 F8P00451 2351 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 A0A087WXM4 84 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 IGKV1-12A0A0C4DH73 117 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 OR2AT4A6NND4 320 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 KIAA1324LA8MWY0 1029 aaPredicted RBP15.61■□□□□ 0.09
SSU72-203ENST00000378725 F8VVB4 439 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 F8VWA3 439 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 ADAM20O43506 726 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 SPRY1O43609 319 aaPredicted RBP15.61■□□□□ 0.09
SSU72-203ENST00000378725 FOXH1O75593 365 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 KDM4BO94953 1096 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 NXPH2O95156 264 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 CYB5AP00167 134 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 IGKV1D-12P01611 117 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 PSG2P11465 335 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 ZNF16P17020 682 aaPredicted RBP15.61■□□□□ 0.09
SSU72-203ENST00000378725 DVL1P1P54792 670 aaPredicted RBP15.61■□□□□ 0.09
SSU72-203ENST00000378725 FABP5Q01469 135 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 SMIM21Q3B7S5 101 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 FAM27D1Q5T7N8 215 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 ASCL4Q6XD76 172 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 ZNF788Q6ZQV5 615 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 CDH26Q8IXH8 852 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 Q8IYB0 196 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 NR1H4Q96RI1 486 aaPredicted RBP15.61■□□□□ 0.09
SSU72-203ENST00000378725 CCL13Q99616 98 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 RHOFQ9HBH0 211 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 ZNF222Q9UK12 451 aa15.61■□□□□ 0.09
SSU72-203ENST00000378725 ACANP16112 2415 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 IGKV1D-17A0A075B6S4 117 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 MAGEA13PA6NCF6 341 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 TRIM64CA6NLI5 447 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 CCRL2O00421 344 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 GABRPO00591 440 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 ANGPTL7O43827 346 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 RGS9O75916 674 aaPredicted RBP15.6■□□□□ 0.09
SSU72-203ENST00000378725 PSMB9P28065 219 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 ZNF93P35789 620 aaPredicted RBP15.6■□□□□ 0.09
SSU72-203ENST00000378725 NPBWR2P48146 333 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 PITPNBP48739 271 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 NPY4RP50391 375 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 ESCO2Q56NI9 601 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 DDI2Q5TDH0 399 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 FAM166AQ6J272 317 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 CD200R1LQ6Q8B3 271 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 SLC36A1Q7Z2H8 476 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 SATL1Q86VE3 508 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 LYPD6Q86Y78 171 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 PXT1Q8NFP0 134 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 OR5D18Q8NGL1 313 aa15.6■□□□□ 0.09
SSU72-203ENST00000378725 SSBP3Q9BWW4 388 aaPredicted RBP15.6■□□□□ 0.09
SSU72-203ENST00000378725 SEBOXQ9HB31 216 aaPredicted RBP15.6■□□□□ 0.09
SSU72-203ENST00000378725 MED13LQ71F56 2210 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 TRAV20A0A0B4J274 112 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 PPIAL4CA0A0B4J2A2 164 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 MEGF11A6BM72 1044 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 RFPL4AA6NLU0 287 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 RFPL4AL1F8VTS6 287 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 TRAPPC2LH3BP13 241 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 TMPRSS2O15393 492 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 FCN3O75636 299 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 KNG1P01042 644 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 MAS1P04201 325 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 TMEM225BP0DP42 221 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 CD37P11049 281 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 SRMP19623 302 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 BCL3P20749 454 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 GALP22466 123 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 PTGFRP43088 359 aa15.59■□□□□ 0.09
SSU72-203ENST00000378725 GNB2P62879 340 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms